Detailed information on CNT30710185


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30700605Glycine maxQuercus lobata22.0413.3588.0667reverse complement
CNT30526005Glycine maxPhaseolus vulgaris82.5782.8484.06251forward
CNT30632205Glycine maxVigna unguiculata44.4121.785.19135forward
CNT30200216Glycine maxPisum sativum54.9356.2383.83167forward
CNT30171787Glycine maxTrifolium pratense94.4195.0383.28287forward
CNT30143764Glycine maxMedicago truncatula72.0472.5284.02219forward
CNT30175714Glycine maxVigna angularis58.2258.2284.75177forward
CNT30723394Glycine maxLupinus angustifolius80.2680.7984.02244forward

Expression of CNT30710185

Peptides detected in this lncRNA

>peptide 1 (39 aa)
PSWVTSAYNPSGGTKVMEQNFGLIRLGWWLHHAGLPAPS*

Sequence

>CNT30710185
GCCGAGTTGGGTAACATCAGCTTATAACCCAAGTGGGGGCACCAAGGTGATGGAACAAAACTTTGGATTAATTAGGTTGGGTTGGTGGCTGCACCATGCT
GGCCTGCCCGCTCCAAGTTGAGAGTTGAACCATGGGGTCTGAGCGAAGGCACAGGTTTCCTGGTTTCTAGACGAGGGGGTATTGCGTGAGGCTGGTTTCA
CAGAGCAGCGATCACCCCTGGCTCTTGACAGTGGAGGGATTACAGGTTGCTTCACTTCCAGCCCATATAAACCTGATGATCCTAGCTCTTGAACCATCAC
TTTT