Detailed information on CNT30200216


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526005Pisum sativumPhaseolus vulgaris88.8987.1379.92264forward
CNT30710185Pisum sativumGlycine max56.2354.9383.83167forward
CNT30171787Pisum sativumTrifolium pratense10098.3486.53297forward
CNT30143891Pisum sativumMedicago truncatula79.4677.6381.78236forward
CNT30623435Pisum sativumDaucus carota19.5320.7987.9358reverse complement
CNT30619930Pisum sativumCajanus cajan47.4723.4681.56141forward
CNT30417933Pisum sativumPapaver somniferum20.546.0990.1661reverse complement
CNT3030049Pisum sativumTheobroma cacao22.2221.587.8866forward
CNT30724927Pisum sativumLupinus angustifolius79.1277.381.28235forward

Expression of CNT30200216

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MEHGLNRLGWWLHHVGLPAPSCELTHGTCAKAYVLCVLDMRV*

Sequence

>CNT30200216
TTTGCCGAGCTGAGTTGCGCCAGCTTGTGACCCATGTGGGGGCATCAAGGTGATGGAACATGGGCTTAACAGGTTGGGTTGGTGGTTGCACCATGTTGGC
CTGCCCGCTCCAAGTTGTGAGTTGACCCATGGGACTTGTGCGAAGGCATATGTCTTGTGTGTATTAGACATGAGGGTATAGCGTGAGGCTGGTTTCACAG
AGCAGCGAACACTTCCTACTCTTGACAGTGGAGGGATCATGGGCCGCTGCACCTCCAGCCCACAACACTTGGTGAGCCTATCCCCTTGAACCATCTC