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Detailed information on CNT30524765


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FY14|TIP1_MEDTR, E-value = 1e-58

BLAST vs NONCODE:
NONGMAT001209, E-value = 8e-68

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618415Phaseolus vulgarisSesamum indicum24.4431.4178.57196forward
CNT30727222Phaseolus vulgarisCorchorus capsularis33.5450.8579.93269forward
CNT30628528Phaseolus vulgarisVigna unguiculata44.6440.3694.41358forward
CNT30708652Phaseolus vulgarisGlycine max34.0488.0690.11273forward
CNT30568703Phaseolus vulgarisActinidia chinensis23.8211.5381.15191forward
CNT3084535Phaseolus vulgarisVigna radiata51.7595.1893.01415forward
CNT30620034Phaseolus vulgarisCajanus cajan34.0425.9887.55273forward
CNT30176366Phaseolus vulgarisVigna angularis43.2772.4494.24347forward
CNT30113763Phaseolus vulgarisFicus carica33.6724.3983.33270forward
CNT3050751Phaseolus vulgarisCucumis sativus33.6727.4480.37270forward

Expression of CNT30524765

Peptides detected in this lncRNA

>peptide 1 (32 aa)
HRFNTKGTTRESRMKKNRMKRTYTEEDRREIQ*

>peptide 2 (84 aa)
MLAPTETATKRPNAWAMEAEMRPAGVAAPLSVSLLKAMPEPEPANTKMRVEMNSARPAFNVSGLVASSGLPMAMFLIGIFNQRR*

>peptide 3 (38 aa)
MAAPEKAPPNKMLAPTMKPMAMGAMVPKLPLLGSMAVA*

Sequence

>CNT30524765
CACCGATTCAACACGAAAGGAACAACCCGGGAAAGTAGAATGAAGAAAAACAGAATGAAAAGAACATACACAGAAGAAGATCGAAGAGAAATTCAATGAT
ACAGATTTTTTTTTTGTTTATTTTTGTGATTTCTGGGTCCAGCTAACAACGGCGGGCCCGAATGTGACTGCAGGGTTCATGGCTGCTCCGGAGAAGGCCC
CACCCAACAAAATGTTAGCGCCAACGATGAAACCAATGGCGATGGGTGCGATGGTTCCCAAACTACCTCTCTTGGGGTCAATGGCGGTAGCGTAGACAGT
GTAAACCAAACCGAAGGTCATCACGATCTCCAACACCAAAGCGTTACCCACTCCAACTCCAGCTGAGAGTCCAAATGCGGGAACAGAGGAGGGAGGCCAC
CACGGAGCCAAGGAGCTGGGCGATGATGTAGACGACACCGCGGAGAAAGGTGACGGCGGGGTTCACGTGACCTCCGGAGATGTTGGCGCCGACGGAGACG
GCGACAAAAAGGCCGAATGCGTGGGCGATGGAGGCGGAGATGAGACCGGCAGGTGTGGCGGCGCCGTTGTCGGTAAGCTTGTTGAAGGCGATGCCGGAAC
CCGAGCCGGCGAACACGAAGATGAGGGTGGAGATGAACTCAGCCAGACCCGCCTTCAATGTGTCGGGGTTAGTGGCCTCCTCGGGCCTTCCGATGGCGAT
GTTTCTGATCGGCATCTTCAATCAACGGCGGTGATGATTACGACTGGTGAAAGATCAGGTGAATACCGATCACTCACTTAAATCACTCTCTGTTTCGCTG
CC