Detailed information on CNT30113763


BLAST search results

BLAST vs Swiss-Prot:
sp|P25818|TIP11_ARATH, E-value = 7e-85

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727224Ficus caricaCorchorus capsularis24.1243.5679.03267forward
CNT30524765Ficus caricaPhaseolus vulgaris24.3933.6783.33270forward
CNT30628402Ficus caricaVigna unguiculata30.8940.5283.92342forward
CNT30568703Ficus caricaActinidia chinensis26.217.581.38290forward
CNT3084637Ficus caricaVigna radiata27.4626.4184.87304forward
CNT30620034Ficus caricaCajanus cajan24.3925.6985.93270forward
CNT30579360Ficus caricaEchinochloa crusgalli20.8738.0684.85231forward
CNT30176366Ficus caricaVigna angularis26.836284.85297forward

Expression of CNT30113763

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MMAFFFFFLTIYYYFSVVCGWELLVGVGDEEELVDEPHRTAHQSRCWLQQ*

>peptide 2 (61 aa)
MSPIERPTSQDVGSNNETNRDGGDNSQIALLRVNGCGVHRVDQSEGQHDLQNDSVPDTNSG*

>peptide 3 (30 aa)
MLAPTMKPIAMGAIIPKLPFFGSMAVAYTV*

>peptide 4 (88 aa)
MPRRRVMLPPTKAPKVTAGLTCPPEMLAATATATKRAKPWAMAAEMRPEGVVAPSSVSLLNAMLEPDPANTKIKVEMNSANAALRASG*

Sequence

>CNT30113763
GATACAACAGAATAAACACATATCAATTTCACACCCTAGCTTCCAATAGAAATCACACACAAATTCATTGATCCAGGGAAAAACTACAACATGGTGGGGA
TCATGATCGTGATTAATTGATGAAAAGATCAACGGTGCAGATTAAACAACAAAAGAAACTCCCGGGAAGCAAATAAATACACCAAAGTTGGAAATCAAAA
GCCGTAGGAGAAACGGTGCGTTTTAATGATGGCTTTCTTTTTCTTTTTTCTAACAATTTATTATTATTTTTCAGTAGTCTGTGGTTGGGAGCTGCTCGTG
GGTGTGGGAGATGAAGAAGAACTCGTAGATGAGCCCCATCGAACGGCCCACCAGTCAAGATGTTGGCTCCAACAATGAAACCAATCGCGATGGGGGCGAT
AATTCCCAAATTGCCCTTCTTCGGGTCAATGGCTGTGGCGTACACCGTGTAGACCAGTCCGAAGGTCAGCACGATCTCCAAAACGACAGCGTTCCAGACA
CCAATTCCGGTTAGACCGAAAGCTGGAATAGCCTGCGAAGCACCGAAATAAAACCCATCCAAAAAAGGAAAAAGTTAGTTTAGGCCGTTAATAACGTAAC
TGTATTGAAACTAACTTTGGTGGAAATGATAAACTCACCAAGCCGCCGGTGGAGAACTTGAGGAGGAGGACGGCGACGGTGGAGCCGAGGAGCTGGGCGA
TCCAGTAGAGGATGCCGCGGAGGAGGGTGATGTTGCCGCCGACGAAGGCGCCAAAGGTGACGGCGGGGTTGACGTGTCCGCCGGAGATGTTGGCGGCGAC
GGCGACGGCCACGAAGAGGGCGAAGCCGTGGGCGATGGCGGCGGAAATGAGGCCGGAGGGGGTGGTGGCGCCGTCGTCGGTGAGCTTGTTGAACGCCATG
CTAGAGCCCGACCCGGCAAACACGAAGATCAAGGTGGAGATGAACTCGGCCAACGCCGCCTTGAGAGCGTCGGGGTGAGTCGCCTCCTCCCGACCACCGA
TGGCGATGTTTCGGATCGGCATATTTTTAATGATTTAAGTAATGACGAACGGAAAGTGATTTCGTTTCTCACCGCCGAGAAGGTGGAGAGTTTAGCTAGT
AGCACTA