Detailed information on CNT3050751


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FY14|TIP1_MEDTR, E-value = 8e-97

BLAST vs NONCODE:
NONGMAT001209, E-value = 2e-22

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549654Cucumis sativusIpomoea triloba12.83584.13126forward
CNT30382128Cucumis sativusManihot esculenta14.4336.4185.92142forward
CNT30524765Cucumis sativusPhaseolus vulgaris27.4433.6780.37270forward
CNT30628528Cucumis sativusVigna unguiculata27.7430.7880.59273forward
CNT30708652Cucumis sativusGlycine max21.5468.3983.49212forward
CNT3096857Cucumis sativusSolanum tuberosum10.2636.282.18101forward
CNT30146554Cucumis sativusMedicago truncatula16.7744.4789.09165forward
CNT30620034Cucumis sativusCajanus cajan30.1828.2681.48297forward
CNT30176366Cucumis sativusVigna angularis30.186280.13297forward
CNT30113801Cucumis sativusFicus carica15.4536.882.89152forward
CNT30726138Cucumis sativusLupinus angustifolius27.3454.6778.44269forward

Expression of CNT3050751

Peptides detected in this lncRNA

>peptide 1 (77 aa)
MEAPVNAPPAKMLAPTMKPIAMGAIVPKLPFLGSTAVAYTVYTNPNVMTISKTKAFSSPTPADRAKLPLSNPVDDTT*

>peptide 2 (84 aa)
MATGDVSANGDGNEKSKGMGDGGGDETSWSGSAVIGELIKGYAGTLASKNKNQGGDKLSQSSLQSIWMSSLFGPSNCNVTDRHG*

>peptide 3 (34 aa)
MMMMIKSCKDPTLTNETRPNPSDKRNLTKPNTPD*

>peptide 4 (89 aa)
MIPRRRVMLPPTKAPKVTAGLTWPPEMLAPTETATKRAKAWAMEAEMRPAGVAAPSLVSLLKAMPEPWPAKTKIKVEINSANPAFKASG*

Sequence

>CNT3050751
ATTTAGTTTTTTTTTTTTTTTTTTTAAGAAAAAAATAAAAGACTTTAAAAATAAATCACGTACAGACAGGAGCAGAATAACATAAATTACAACCTGGCCC
TGATTTTCTTTCATCTTCAATCAAATCATCGCAGAGTCCAGACACGGCACTCAACGACGACTACAAAGATGATGATGATGATCAAATCATGTAAAGATCC
AACGCTCACAAATGAGACACGACCAAACCCATCCGATAAAAGAAACTTAACAAAACCAAATACACCAGATTAAAAAGAAAAGAAAAGAGTGGCCACCACC
GATCAAAGGCCCGGCCCAGTAGATCCAGTGGCTTTCCCATGACCAGCTCACGACTGATGGGCCGAATGCGACGGCGGGGTTCATGGAGGCTCCGGTGAAT
GCTCCACCGGCCAAAATGTTGGCTCCGACGATGAAACCGATTGCGATGGGTGCAATTGTTCCCAAACTGCCCTTCTTGGGATCCACTGCGGTCGCGTACA
CCGTGTACACCAATCCGAATGTCATGACGATCTCGAAAACGAAGGCGTTCAGTTCACCAACTCCTGCTGATAGAGCGAAGCTTCCGTTGAGCAATCCAGT
AGATGATACCACGTAGAAGGGTGATGTTACCGCCAACGAAGGCACCAAAGGTAACAGCGGGGTTAACATGGCCACCGGAGATGTTAGCGCCAACGGAGAC
GGCAACGAAAAGAGCAAAGGCATGGGCGATGGAGGCGGAGATGAGACCAGCTGGAGTGGCAGCGCCGTCATTGGTGAGCTTATTAAAGGCTATGCCGGAA
CCTTGGCCAGCAAAAACAAAAATCAAGGTGGAGATAAACTCAGCCAATCCAGCCTTCAAAGCATCTGGATGAGTAGCCTCTTCGGGCCTTCCAATTGCAA
TGTTACGGATCGGCATGGCTAGTAATAATTAGAGAACTTTAAAATGAAAATTCTTTAGAATTAATTGTAGTTTGTAGTACTCCA