Detailed information on CNT30620034


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FY14|TIP1_MEDTR, E-value = 5e-57

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677458Cajanus cajanSetaria viridis15.8938.9382.04167forward
CNT30618415Cajanus cajanSesamum indicum19.2232.3781.19202forward
CNT30727224Cajanus cajanCorchorus capsularis21.6937.1983.77228forward
CNT30524765Cajanus cajanPhaseolus vulgaris25.9834.0487.55273forward
CNT30628402Cajanus cajanVigna unguiculata32.5440.5289.47342forward
CNT30568703Cajanus cajanActinidia chinensis20.1712.7981.6212forward
CNT30586176Cajanus cajanMusa acuminata15.7927.2183.13166forward
CNT3084637Cajanus cajanVigna radiata29.1226.5988.24306forward
CNT30542059Cajanus cajanBrassica napus21.3128.0779.46224forward
CNT30552975Cajanus cajanOryza glaberrima12.4622.5987.79131forward
CNT3075983Cajanus cajanBrassica juncea22.2633.3879.06234forward
CNT301194Cajanus cajanZea mays17.3236.4780.22182forward
CNT30643380Cajanus cajanCannabis sativa10.5623.5781.98111forward
CNT3057332Cajanus cajanAmborella trichopoda15.9828.8282.14168forward
CNT30579360Cajanus cajanEchinochloa crusgalli18.1731.4787.96191forward
CNT30176366Cajanus cajanVigna angularis28.7363.0589.4302forward
CNT30113763Cajanus cajanFicus carica25.6924.3985.93270forward
CNT3050751Cajanus cajanCucumis sativus28.2630.1881.48297forward

Expression of CNT30620034

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MIKNSMRIEKKKERSGVAQEYKQADPNDDTFKFQWWTKGVKIIKLKRREHGFNRNEKHKEGKA*

>peptide 2 (84 aa)
MDAPSKARSKEATMDPRSWAMTYAMPRRKVMLPPTKAPKVTAGFTWPPEMLAPTDTATKRANAWAMAAEIRPAGVAAPLSVSLL*

>peptide 3 (93 aa)
MLRIGIFHYADRFSLLTSHFSLLTSHSTLCFGATAFRFLASYISTLNNTPPALPGSRLFPFFFFFQVSKLFAVLPKMTGIKFFKNTKPEKKQSY

Sequence

>CNT30620034
GCATGGTAAAGCTTTATGATTAAGAATTCAATGAGAATAGAAAAAAAGAAAGAAAGAAGTGGAGTGGCACAAGAGTACAAGCAAGCAGACCCGAATGATG
ATACATTCAAATTTCAATGGTGGACCAAGGGAGTGAAAATAATTAAACTTAAGAGAAGAGAACACGGATTCAACAGGAATGAAAAACACAAGGAAGGAAA
AGCATAGACAGAAGAAATTCAATAATACAGAATTAAGAGTCTAGTAGTCAGTGGTGGGGAGCTGCTCGTGGGTGTGGCTGATGAAGACGACCTCGTAGAT
AAGCCCAGCGAGCCCACCACCGATGAGAGGCCCAACCCAGTAGATCCAGTGGTTGTCCCAGGTCCAGCTGACGACTGCAGGCCCAAAAGAAACGGCCGGG
TTCATGGATGCTCCATCGAAGGCCAGGAGCAAGGAGGCCACGATGGACCCCAGGAGCTGGGCGATGACGTACGCGATGCCGCGAAGGAAGGTGATGTTGC
CGCCCACGAAGGCGCCGAAGGTCACGGCGGGGTTCACGTGGCCGCCGGAGATGTTGGCGCCCACGGACACGGCCACGAAGAGGGCGAATGCATGGGCGAT
GGCGGCGGAGATCAGACCAGCGGGGGTGGCGGCGCCGTTGTCGGTGAGCTTGTTGTAGGCGATGCCGGAGCCTGAACCGGCGAAGACGAAGATGAGCGTG
GAGATGAACTCAGCCAACGCCGCCTTCAACGTGTCGGGGTGAGTTACCTCTTCGGGCCTTCCAACGGCGATGTTACGGATCGGCATCTTCCACTACGCTG
ATCGCTTCTCACTTCTCACTTCTCACTTCTCACTTCTCACTTCTCACTCAACTCTCTGTTTCGGTGCCACTGCTTTTCGCTTCCTCGCCTCTTATATATC
CACTCTCAACAACACTCCACCGGCTCTACCCGGTTCCCGGTTGTTTCCTTTTTTTTTTTTCTTTCAGGTTTCGAAATTATTTGCAGTACTTCCAAAAATG
ACGGGAATCAAGTTTTTCAAAAACACCAAGCCGGAAAAGAAACAATCCTAT