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Detailed information on CNT3086211


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512873Vigna radiataJuglans regia22.5719.6884.93146forward
CNT30726085Vigna radiataLupinus angustifolius12.6724.5587.882forward

Expression of CNT3086211

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MIGLQTASTSLSFSSYSSFSTLWLSSSHSNASFT

>peptide 2 (36 aa)
LILPFVHVRGKDSMRNSRTNTGLKVASFHKMPSIIF*

Sequence

>CNT3086211
CATTAATACTACCCTTTGTCCATGTTCGAGGAAAAGATTCAATGAGAAATTCAAGAACCAATACAGGTTTGAAAGTCGCTAGCTTCCATAAAATGCCATC
AATAATATTTTAAAAATATTACCTGCTCTAATTAAGAATTATTATAATTATTAAGATTACTTCAAACCAAAAACTGAGTGTTAGCACTGGAACCCTTTGT
TGTAAAAAACGCGACACAGGAACGTAACAAAAGCAAACAGAAAGACCGACCAGAACGAAGCATACTGATACAGCTGAAAAAGATTCGTCGTAAAAACTAG
TTAAAAAAAAGGAAAATACAAGTAATTTCACAGGTATCTTATCATCGCCACCAAAAAAGCAAGCGCAGGGGAATTTCTTAATTCCCAGCTTTAATAAAAA
TTAACAGACTCCGACTAATCTATTGTTTCTCATCATATCTAAAGCATAACAAACATTTCTAGAGCTCGTCGTGAGAGTCGTCCTCGTCCTCGCCTGATTC
ACCACCACCTGGGGCTCCTCCTGATCTTTGATACACAGCACTGATGATTGGATTGCAAACGGCTTCCACCTCCTTAAGCTTCTCCTCATATTCTTCTTTC
TCAACACTCTGGTTGTCATCAAGCCATTCCAATGCTTCCTTCACTGC