Detailed information on CNT30370131


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3042656Oryza glumipatulaPrunus dulcis50.4815.8786.79106forward
CNT3098506Oryza glumipatulaSolanum tuberosum38.573.985.1981forward
CNT30586560Oryza glumipatulaMusa acuminata83.8112.2383.52176forward
CNT3085565Oryza glumipatulaVigna radiata3022.7490.4863forward
CNT30454273Oryza glumipatulaSaccharum spontaneum9087.189.95189forward
CNT30596150Oryza glumipatulaOryza meridionalis10088.9898.1210forward
CNT30704355Oryza glumipatulaPrunus avium62.3810.9783.97131forward
CNT3035937Oryza glumipatulaCucumis melo80.9512.8782.35170forward
CNT30585090Oryza glumipatulaEchinochloa crusgalli94.2911.5791.41198forward
CNT30116501Oryza glumipatulaOryza nivara56.1928.8599.15118forward

Expression of CNT30370131

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MHSPSDLHCIPRYMKCHSQLAPAQTKISGRQ*

>peptide 2 (37 aa)
PFVLAFVRVVILGVDSTIVNDEIKCIVHQTSIASLVI*

Sequence

>CNT30370131
ACCGTTCGTCCTTGCCTTTGTAAGGGTAGTCATCCTCGGTGTCGATTCCACCATTGTTAATGATGAAATCAAATGCATAGTCCATCAGACCTCCATTGCA
TCCCTCGTTATATGAAGTGTCACAGTCAACTAGCTCCTGCTCAGACAAAGATATCAGGTCGCCAGTAACAATCTGGTTGATGCCTTCTACAGCTGCTATT
GCTGAGAAAG