Detailed information on CNT3085565


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3042656Vigna radiataPrunus dulcis30.3212.5783.3384forward
CNT30143968Vigna radiataMedicago truncatula49.4640.6584.67137forward
CNT30454273Vigna radiataSaccharum spontaneum18.0523.049450forward
CNT30624236Vigna radiataDaucus carota38.273.8884.91106forward
CNT30596150Vigna radiataOryza meridionalis22.7426.6988.8963forward
CNT30370131Vigna radiataOryza glumipatula22.743090.4863forward
CNT30704355Vigna radiataPrunus avium30.697.1284.7185forward
CNT30116501Vigna radiataOryza nivara22.7415.492.0663forward

Expression of CNT3085565

Peptides detected in this lncRNA

>peptide 1 (66 aa)
EAIIFLKNQDQVTNPVLVTCTINSTVRIILLGINASIVDDELKCIVHKSSIASCVISSITIHQFLF*

Sequence

>CNT3085565
TAGAAGCCATTATTTTCTTAAAAAATCAGGACCAAGTTACTAACCCTGTACTGGTCACATGTACCATCAACAGCACGGTAAGGATAATCCTCCTCGGAAT
CAATGCCTCCATTGTTGATGATGAACTCAAATGCATAGTCCATAAGTCCTCCATTGCATCCTGCGTTATATCCTCTATCACAATCCACCAATTCTTGTTC
TGATAATGAAATCAGTTCGCCAGTCACTATCTTATTAATTCCTTCCACTGCACCAATTGCTGAGAATGACCAACAGC