Detailed information on CNT3042656


BLAST search results

BLAST vs Swiss-Prot:
sp|A0A068CNX1|VANSY_GLEHE, E-value = 3e-15

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3085565Prunus dulcisVigna radiata12.5730.3283.3384forward
CNT30143968Prunus dulcisMedicago truncatula14.5228.7883.5197forward
CNT30454273Prunus dulcisSaccharum spontaneum15.8748.8585.85106forward
CNT30596150Prunus dulcisOryza meridionalis19.6155.5183.97131forward
CNT30370131Prunus dulcisOryza glumipatula15.8750.4886.79106forward
CNT30704355Prunus dulcisPrunus avium41.3223.1297.46276forward

Expression of CNT3042656

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MKYSITDKLSISWNLNVGYEKVSKYDKRRRRISRCPDFSSFLAFVTTS*

>peptide 2 (75 aa)
MRPPLHPSLYDLSQSTSSCSDSERRSPVTSLLIPSTEEIIAKRRTAMVDDDLYGPMFLLCSLCLFAEKQSEGSECV

>peptide 3 (33 aa)
MHDINRALYTYKSAYEILHNRQTIHFLESKCWI*

>peptide 4 (38 aa)
MLSLRTAPLATTNCPVRCHRWHHILYKDNPLHCQFHHC*

Sequence

>CNT3042656
GGATCAGAATGAAGCACTTCATAAAGGCGAATGCCAAATTCATGACTGAATTTACAAAACATATTGGTAATTGACAACAATCTGTTTGTCTATAACTCAA
ATGCATGACATAAATAGAGCGCTATATACATACAAATCAGCATATGAAATACTCCATAACAGACAAACTATCCATTTCTTGGAATCTAAATGTTGGATAT
GAGAAAGTGAGCAAGTATGATAAACGAAGAAGAAGAATATCAAGGTGCCCTGATTTTTCTTCCTTCCTAGCTTTTGTTACCACTTCATAAAAGCACTGAA
TGTTAAGCTTAAGAACTGCTCCTCTTGCCACCACCAATTGCCCAGTGAGGTGTCACAGGTGGCATCATATCCTTTATAAGGATAATCCTCTTCACTGTCA
ATTCCACCATTGCTGATGATGAATTCGAAGGCATAATCCATGAGACCTCCATTGCATCCTTCATTGTATGATTTGTCACAGTCAACCAGCTCCTGCTCAG
ATAGTGAGAGGAGATCTCCAGTCACTAGCTTGTTAATCCCTTCCACTGAAGAGATTATCGCGAAGAGGAGGACCGCCATGGTCGACGACGATCTGTACGG
TCCCATGTTTTTGCTGTGCTCTCTGTGTTTGTTTGCTGAGAAACAGAGTGAAGGAAGTGAATGTGTAC