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Detailed information on CNT30369334


BLAST search results

BLAST vs Swiss-Prot:
sp|P12330|CB21_ORYSJ, E-value = 1e-121

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690606Oryza glumipatulaOryza sativa50.955.3100480forward
CNT30300533Oryza glumipatulaTriticum aestivum63.158.2892.94595forward
CNT30587514Oryza glumipatulaMusa acuminata56.163.5890.36529forward
CNT30552254Oryza glumipatulaOryza glaberrima50.6947.94100478forward
CNT30440655Oryza glumipatulaAegilops tauschii63.159.592.94595forward
CNT30251666Oryza glumipatulaAvena sativa63.7358.9288.69601forward
CNT30665158Oryza glumipatulaTriticum dicoccoides63.162.1191.43595forward
CNT30129910Oryza glumipatulaCorymbia citriodora25.0337.4694.49236forward
CNT30684955Oryza glumipatulaTriticum urartu63.159.9892.27595forward
CNT30721831Oryza glumipatulaTriticum spelta36.840.9791.64347forward
CNT30574765Oryza glumipatulaOryza barthii51.6454.998.97487forward

Expression of CNT30369334

Peptides detected in this lncRNA

>peptide 1 (84 aa)
PGTNQIKIILHNQVHCTSFINQPDNIVLHNLNERSKYSGTRKEENVARLTAACMKAMDLTAVARRRSTLTCRGRSWWRRPMRCC*

>peptide 2 (28 aa)
MVDAAIDASLGLGGDGHRCFWNVCLLSSS

>peptide 3 (29 aa)
MAHRQWITSSSRFLANVSGSADSPAVSQP*

>peptide 4 (43 aa)
MAWTKNPNMENMARRPFLISFTLSSANASGSSARPSGSKLPPG*

Sequence

>CNT30369334
CCAGGAACAAATCAGATAAAAATTATTTTACACAATCAGGTCCATTGTACTTCTTTCATCAACCAACCAGATAACATTGTTTTACACAATCTGAACGAAC
GAAGCAAATATTCGGGTACGCGGAAAGAGGAGAACGTCGCGCGTCTCACCGCAGCCTGCATGAAAGCAATGGACCTCACCGCCGTTGCTCGCCGGAGATC
CACACTCACTTGCCGGGGACGAAGTTGGTGGCGTAGGCCCATGCGTTGTTGTTGACGGGGTCGGCCAGGTGGTCGGCCAGGTTCTCCAGTGGCCCCTTGC
CGGTGACGATGGCCTGGACGAAGAACCCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGATCTCCTTCACCTTGAGCTCGGCGAACGCCTCGGGGTC
GTCGGCGAGGCCGAGCGGGTCGAAGCTGCCGCCGGGGTAGTCGAGCCCCCCCTCGCTGAAGATCTGGGACCCCGCCTTGAACCACACGGCCTCGCCGAAC
TTCACGCCGTTGCGGGCGAGGAGCTCCGGGAAGACGCAGCCGAGCGCGCCCAGCATGGCCCACCGGCAGTGGATCACCTCCAGCTCCCGGTTCTTGGCGA
ACGTCTCCGGGTCGGCCGACAGCCCGGCGGTGTCCCAGCCGTAGTCGCCGGGGAACTCGCCGGTGAGGTAGGACGGCGGCTCGCCGGAGAGCGGGCCGAG
GTAGAGCACGCGGTCGGCGCCGTACCACGGGCTCCCCGACGCCGCGGCGGGCTTGGGCTTGGCCGCCGACTTGCGCATCGTGACGCGGCCCTCGCCGAAC
ACCTTGGCATTGGCGACCGCCTTGCCGGCGAGGGCGGCAGGGGAGGAGAGTGCCATGGTGGACGCCGCCATTGACGCGAGCCTAGGACTAGGAGGAGATG
GCCACAGATGCTTTTGGAATGTGTGTCTTTTGAGCTCGTCAGC