Detailed information on CNT30253145


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FM86|ADT5_ARATH, E-value = 1e-08

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671274Avena sativaSetaria viridis44.3418.4685.4137forward
CNT3020944Avena sativaCitrullus lanatus66.6749.5282.52206forward
CNT30162003Avena sativaPistacia vera39.8125.8486.99123forward
CNT30441730Avena sativaAegilops tauschii65.721.1594.58203forward
CNT30314202Avena sativaCamelina sativa37.5429.3791.38116forward
CNT3041636Avena sativaChlamydomonas reinhardtii23.326.1887.572forward
CNT30715150Avena sativaMalus domestica golden59.5576.0384.78184forward
CNT30426944Avena sativaPapaver somniferum64.7266.8987200forward
CNT3058427Avena sativaAmborella trichopoda33.6634.6782.69104forward
CNT30329515Avena sativaDioscorea rotundata58.923.8282.97182forward
CNT30495633Avena sativaDigitaria exilis23.313.6984.7272forward
CNT30724403Avena sativaLupinus angustifolius37.5431.3585.34116forward

Expression of CNT30253145

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MGAAAVFDTAADTEGHMLRARTTPEKLEPRWNCPPNF*

Sequence

>CNT30253145
TGGGGAAGTAACGGATAACATTAGCAGTGTTTCCTCTCCACAGTGAGCCAAAACCTTCATCCTTGATGGTGCGCCCAAAGCACTCACCAATACCCTTGTA
TGGCTCAGAGAGCCTGCCAGACTTGAGCATCTCATCCTGGTTCTGAATAAGCAGCTTAACACGCTCAATGGGAGCAGCAGCAGTCTTTGACACTGCAGCT
GACACAGAAGGGCACATGTTGCGGGCACGGACAACTCCAGAGAAGCTGGAGCCAAGGTGGAACTGTCCACCAAACTTCTGAACAACAGACGGCTGGTTGG
CCTGGTCCG