Detailed information on CNT30572637


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30488016Vitis viniferaOlea europaea56.8633.5390.52116forward
CNT30162005Vitis viniferaPistacia vera508.5188.24102forward
CNT30606478Vitis viniferaGossypium raimondii95.191.5190.72194forward
CNT30369687Vitis viniferaOryza glumipatula68.1443.4486.33139forward
CNT30432300Vitis viniferaPapaver somniferum35.7832.0286.373reverse complement
CNT30329515Vitis viniferaDioscorea rotundata50.4913.4886.41103forward
CNT30115985Vitis viniferaOryza nivara32.8414.1194.0367forward
CNT30334024Vitis viniferaCynara cardunculus51.9631.1892.45106forward
CNT30725405Vitis viniferaLupinus angustifolius21.0812.6193.0243forward

Expression of CNT30572637

Peptides detected in this lncRNA

>peptide 1 (56 aa)
HRRSSSFFYEPCQSGRMQDGFGHSPASKQIEGTKHQQHLLTPSFQQTISSNHPCLS*

>peptide 2 (29 aa)
TGGHHHSSTNRVNRVGCKTGSGIVQRVNK*

Sequence

>CNT30572637
CACCGGAGGTCATCATCATTCTTCTACGAACCGTGTCAATCGGGTAGGATGCAAGACGGGTTCGGGCATAGTCCAGCGAGTAAACAAATAGAAGGGACGA
AGCACCAGCAGCACCTCCTGACGCCAAGTTTCCAGCAAACCATTTCCAGTAACCATCCCTGTCTTTCTTGAAATTGAAAAGCCTCTTGAAGTAATCCTTG
AATG