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Detailed information on CNT30318775


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535409Asparagus officinalisEucalyptus grandis14.7825.0990.2872forward
CNT30547454Asparagus officinalisIpomoea triloba14.7821.9591.6772reverse complement
CNT30372997Asparagus officinalisArabidopsis thaliana20.9414.0785.29102reverse complement
CNT30503674Asparagus officinalisNicotiana attenuata14.1722.786.9669reverse complement
CNT3044357Asparagus officinalisPrunus dulcis12.9420.7290.4863reverse complement
CNT30158859Asparagus officinalisPistacia vera13.9623.6992.6568forward
CNT3096677Asparagus officinalisSolanum tuberosum12.3220.6288.3360forward
CNT30313675Asparagus officinalisCamelina sativa12.3220.2788.3360forward
CNT3059454Asparagus officinalisArabidopsis lyrata20.9433.6684.31102reverse complement
CNT30128358Asparagus officinalisCorymbia citriodora13.5523.9190.9166forward
CNT30477933Asparagus officinalisArabidopsis halleri20.9433.6684.31102reverse complement
CNT30644781Asparagus officinalisCannabis sativa13.1427.4793.7564forward
CNT3030049Asparagus officinalisTheobroma cacao13.3521.1789.2365reverse complement
CNT3026903Asparagus officinalisPopulus trichocarpa14.5823.3688.7371reverse complement

Expression of CNT30318775

Peptides detected in this lncRNA

>peptide 1 (87 aa)
MHSTAARDPSTAESGRFSLLCEASLTRCPALQETSEPSLRSAHTHHCPTWNGRASRECCTTRSSYKAQRSRPLNAPLGYKPTLLSSAI

>peptide 2 (41 aa)
MAKEVGSLVDCNWVYCGCTAQQPVILPPLRAGGFRCSVKPA*

Sequence

>CNT30318775
GTTTACCCTTAAAAAAATTTCTAGCTTAAAAAAAAGGTGATTTTCTGGTGCTGAAAAATATCACGTAATATAAAAAAATGTATGTAATTTAACGATAATT
ATTGTAAAATCAATAATGTAAAGGACTTCGTTACTTTATATGTACATCTAATGGAAAATTTTCAGTAAAAAATGGCAAAAGAGGTGGGTTCGTTGGTGGA
CTGTAACTGGGTCTATTGCGGATGCACAGCACAGCAGCCCGTGATCCTTCCACCGCTGAGAGCGGGAGGTTTTCGCTGCTCTGTGAAGCCAGCCTGACGC
GGTGCCCTGCCCTTCAAGAAACGAGTGAGCCCAGCCTTCGCTCGGCCCACACGCATCACTGCCCAACTTGGAACGGGCGGGCCAGCAGAGAGTGCTGCAC
AACCAGGTCCAGTTACAAGGCCCAACGTTCACGACCACTTAATGCCCCGCTTGGTTACAAGCCCACGCTACTGAGCTCGGCGATCGA