Detailed information on CNT30197165


BLAST search results

BLAST vs Swiss-Prot:
sp|P10708|CB12_SOLLC, E-value = 5e-54

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30282763Pisum sativumChenopodium quinoa5019.4782.58155forward
CNT30727388Pisum sativumCorchorus capsularis26.4525.1584.1582forward
CNT30708597Pisum sativumGlycine max73.8745.885.59229forward
CNT3044098Pisum sativumPrunus dulcis65.4838.8184.73203forward
CNT30221764Pisum sativumHordeum vulgare21.6123.5186.5767forward
CNT30657963Pisum sativumTriticum dicoccoides29.3532.585.7191forward
CNT30651400Pisum sativumRosa chinensis73.8747.2284.72229forward
CNT30126375Pisum sativumCorymbia citriodora47.144.6580.14146forward
CNT30619887Pisum sativumCajanus cajan54.8465.6487.06170forward
CNT3053136Pisum sativumAmborella trichopoda20.6514.5587.564forward
CNT30725037Pisum sativumLupinus angustifolius57.4220.7784.83178forward
CNT3050430Pisum sativumCucumis sativus62.5854.6582.99194forward

Expression of CNT30197165

Peptides detected in this lncRNA

>peptide 1 (43 aa)
SKNSSVTGISKVGEEVIDRTAPITANIANLPFLISFVLNSLSF*

Sequence

>CNT30197165
AGCAAAAATAGTAGCGTGACCGGGATCAGCAAGGTGGGCGAAGAGGTTATCGATAGGACCGCTCCCATAACAGCCAACATAGCCAATCTCCCATTCTTAA
TTTCCTTTGTTCTCAACTCCTTAAGCTTCTGAGGAGAAGCACTTCCCCAACCAAGTGGATCAAACCAAAGTCCACCAGGGTACCCTACATCAGTTCCTGT
GAGCTTGTTGTTTGGGAAAATAGGGTCGGTGTTGACGCAGCCTGGATTGAGGATGTCAGCCCATCTTCTTCCCTCGGCCCAACCGATGAAAACGAGTTCG
ACTATGAAGA