Detailed information on CNT30657963


BLAST search results

BLAST vs Swiss-Prot:
sp|P13869|CB12_PETHY, E-value = 6e-55

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30197165Triticum dicoccoidesPisum sativum32.529.3585.7191forward
CNT30708754Triticum dicoccoidesGlycine max54.2925.5984.87152forward
CNT3044098Triticum dicoccoidesPrunus dulcis3016.0686.984forward
CNT3013862Triticum dicoccoidesZea mays72.8629.2392.65204forward
CNT30651400Triticum dicoccoidesRosa chinensis53.2130.7283.89149forward
CNT30619887Triticum dicoccoidesCajanus cajan3032.4385.7184forward
CNT30725037Triticum dicoccoidesLupinus angustifolius72.8623.881.37204forward
CNT3050430Triticum dicoccoidesCucumis sativus25.362088.7371forward

Expression of CNT30657963

Peptides detected in this lncRNA

>peptide 1 (92 aa)
YPTSVPVSLLLGKMGSVLTQPGLMMSAHRRPSAQPMRMSSTMKRVVVSVKYSCSPAVYHDGVLRMPILCTSSACTFHRKLSGSDPTPQNRSKI

>peptide 2 (92 aa)
VPDVGAGELVVGEDGVGVDAAGLDDVCPPAALGPADEDELHDEEGGGVGEVLLLPGGVPRRCVEDADLVHQLRLHVPPQALRVGSYTAKSIKD

Sequence

>CNT30657963
GTACCCGACGTCGGTGCCGGTGAGCTTGTTGTTGGGGAAGATGGGGTCGGTGTTGACGCAGCCGGGCTTGATGATGTCTGCCCACCGGCGGCCCTCGGCC
CAGCCGATGAGGATGAGCTCCACGATGAAGAGGGTGGTGGTGTCGGTGAAGTACTCCTGCTCCCCGGCGGTGTACCACGACGGTGTGTTGAGGATGCCGA
TCTTGTGCACCAGCTCCGCCTGCACGTTCCACCGCAAGCTCTCCGGGTCGGATCCTACACCGCAAAATCGATCAAAGATT