Detailed information on CNT30708597


BLAST search results

BLAST vs Swiss-Prot:
sp|P10708|CB12_SOLLC, E-value = 7e-83

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30197165Glycine maxPisum sativum45.873.8785.59229forward
CNT3044098Glycine maxPrunus dulcis3735.3783.24185forward
CNT30651400Glycine maxRosa chinensis50.251.7583.27251forward
CNT30126375Glycine maxCorymbia citriodora26.440.3781.06132forward
CNT30477381Glycine maxArabidopsis halleri49.883.8478.71249forward
CNT30619887Glycine maxCajanus cajan37.271.8188.17186forward
CNT30329735Glycine maxDioscorea rotundata17.827.6485.3989forward
CNT30496219Glycine maxDigitaria exilis21.447.3582.24107forward
CNT30725037Glycine maxLupinus angustifolius61.235.7188.89306forward
CNT3050430Glycine maxCucumis sativus28.640.2881.82143forward

Expression of CNT30708597

Peptides detected in this lncRNA

>peptide 1 (79 aa)
MGSVLTQPGLIMSAHLLPSAQPMKKSSTMKRVVVSVKYSSSPAEYHEGVFKTPIFVRNSGMKMPAAPNIAHLQGAAWEP*

Sequence

>CNT30708597
GGGCAAAGAGGTTGTCAATAGGACCGGTGGCAGTGTAGATCAAGCATGGCCAGTCTGCCATTCTTGATCTCCTTAGTTCTCAAGTCCTTGATCTTCTGAG
GAGAACCGGTTCCCCAACCAAGGGGGTCAAACCAAAGGCCACCAGGGTAACCCACATCGGTTCCGGTGAGCTTGTTGTTGGGAAAGATGGGGTCAGTGTT
GACACAGCCTGGCTTGATTATGTCAGCCCATCTTCTACCCTCGGCCCAGCCAATGAAAAAGAGCTCAACTATGAAGAGGGTAGTAGTGTCCGTGAAGTAT
TCCAGCTCTCCAGCTGAGTACCATGAAGGAGTGTTCAAGACACCAATCTTTGTTAGGAATTCTGGAATGAAAATGCCAGCAGCACCCAACATTGCCCATC
TGCAGGGTGCTGCCTGGGAACCATAGAGGTCTGTCAGGCTCAGCAACTGCGCACACTGTAGTGCCCATCGATCGTCCTCCAATTGCTGCTCTCTCCTTTT