Detailed information on CNT30651400


BLAST search results

BLAST vs Swiss-Prot:
sp|Q36718|CB120_HORVU, E-value = 3e-24

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671443Rosa chinensisSetaria viridis28.2518.981.02137forward
CNT30282763Rosa chinensisChenopodium quinoa50.130.5385.19243forward
CNT30727388Rosa chinensisCorchorus capsularis16.4924.5487.580forward
CNT30197165Rosa chinensisPisum sativum47.2273.8784.72229forward
CNT30708597Rosa chinensisGlycine max51.7550.283.27251forward
CNT3044098Rosa chinensisPrunus dulcis53.449.5292.28259forward
CNT30288773Rosa chinensisTriticum aestivum12.7823.6690.3262forward
CNT30221764Rosa chinensisHordeum vulgare13.422.8186.1565forward
CNT30657963Rosa chinensisTriticum dicoccoides30.7253.2183.89149forward
CNT30612607Rosa chinensisArabis alpina29.0726.1685.82141forward
CNT3013862Rosa chinensisZea mays30.5221.281.76148forward
CNT30126375Rosa chinensisCorymbia citriodora42.0662.3986.27204forward
CNT30619887Rosa chinensisCajanus cajan49.2892.2887.03239forward
CNT3053136Rosa chinensisAmborella trichopoda28.8731.8284.29140forward
CNT30329735Rosa chinensisDioscorea rotundata34.4351.8683.23167forward
CNT30496219Rosa chinensisDigitaria exilis15.2632.7485.1474forward
CNT30725037Rosa chinensisLupinus angustifolius42.4724.0485.92206forward
CNT3050430Rosa chinensisCucumis sativus47.0164.2385.09228forward

Expression of CNT30651400

Peptides detected in this lncRNA

>peptide 1 (52 aa)
NSGVAGISKVSKEVVNGAGTGVDVLKPSTHHSQHSQSPILDLLCPQLLDLLG*

>peptide 2 (40 aa)
MSAHLLPSAHPMKISSTMKRVVVSVKYSCSPAVRGASREP*

>peptide 3 (34 aa)
KQWRGRDQQGEQRGCQWGRYRCRCVETKHPSQPT*

Sequence

>CNT30651400
AAACAGTGGCGTGGCCGGGATCAGCAAGGTGAGCAAAGAGGTTGTCAATGGGGCCGGTACCGGTGTAGATGTGTTGAAACCAAGCACCCATCACAGCCAA
CATAGCCAATCTCCCATTCTTGATCTCCTTTGTCCTCAACTCCTTGATCTTCTCGGGTGAGCCACTTCCCCATCCAAGTGGGTCGAACCAGAGCCCGCCT
GGGTATCCTACGTCTGTCCCGGTGAGCTTGTTGTTGGGGAAGATTGGGTCGGTGTTAACAGACCCAGGCTTGAGGATGTCAGCCCATCTCCTCCCCTCGG
CCCACCCGATGAAAATCAGCTCAACAATGAAAAGGGTGGTAGTGTCAGTGAAGTACTCTTGTTCTCCTGCTGTGAGGGGTGCTTCCCGGGAACCATAGGG
GTCTGTCAGGGTCAGCAGCAGTAGCACATACTCTAAAAGAAGTTGATGATGATCCACTCGGTGCTGCCACGTTTCTCACTCTCAG