Detailed information on CNT3044098


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SYW8|LHCA2_ARATH, E-value = 4e-59

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30282763Prunus dulcisChenopodium quinoa40.3426.5186.73211forward
CNT30727388Prunus dulcisCorchorus capsularis15.1124.2388.6179forward
CNT30197165Prunus dulcisPisum sativum38.8165.4884.73203forward
CNT30708597Prunus dulcisGlycine max35.373783.24185forward
CNT30385452Prunus dulcisTriticum turgidum9.5622.129250forward
CNT30657963Prunus dulcisTriticum dicoccoides16.063086.984forward
CNT30651400Prunus dulcisRosa chinensis49.5253.492.28259forward
CNT30126375Prunus dulcisCorymbia citriodora37.6760.2485.79197forward
CNT30619887Prunus dulcisCajanus cajan48.3797.6887.35253forward
CNT30329735Prunus dulcisDioscorea rotundata30.0248.7684.71157forward
CNT30725037Prunus dulcisLupinus angustifolius21.9913.4288.7115forward
CNT3050430Prunus dulcisCucumis sativus42.6462.8286.1223forward

Expression of CNT3044098

Peptides detected in this lncRNA

>peptide 1 (74 aa)
MCWNQAPITANIASLPFLISFVLSSLIFSGEPLPHPSGSNQSPPGYPTSVPVSLLLGKIGSVLTDPGLRMSAHLL

Sequence

>CNT3044098
GGATGCGTCACCAGCTGATTTGATACATACGGAATCAAAGTCCAGAGAGATTTTTGTACACACAGAAGATCATTCTGTGAAAAAGTAAAACACATCGAGA
CTCTGATATTACAAGTTTTAGTCCTATAAATTTTCCTTGGAAGAACACATATCTCTAAGACGGATTAATAAAAGAGTATGTGATCACCAATGTTGCCCCT
TCTCCCACACTCAAATCCCAATTAGAAATCCCTCACTTTCCTCTCACTTGGGAGTAAAAGCCTCAAAGAGGTTGTCAATTGGGCCAGTGCCAGTGTAAAT
GTGTTGGAACCAAGCCCCCATCACAGCCAACATAGCCAGTCTCCCATTCTTAATCTCCTTTGTCCTCAGCTCCTTGATCTTTTCAGGTGAACCACTTCCC
CATCCAAGTGGGTCGAACCAAAGCCCGCCTGGGTACCCAACGTCCGTTCCGGTGAGCTTGTTGTTGGGGAAGATCGGGTCGGTGTTAACAGACCCAGGCT
TGAGGATGTCGGCCCATCTCCTG