Detailed information on CNT30619887


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671443Cajanus cajanSetaria viridis32.8211.7287.0685forward
CNT30282763Cajanus cajanChenopodium quinoa82.6326.8884.11214forward
CNT30727388Cajanus cajanCorchorus capsularis29.3423.3190.7976forward
CNT30197165Cajanus cajanPisum sativum65.6454.8487.06170forward
CNT30708597Cajanus cajanGlycine max71.8137.288.17186forward
CNT3044098Cajanus cajanPrunus dulcis97.6848.3787.35253forward
CNT30385452Cajanus cajanTriticum turgidum18.5321.2489.5848forward
CNT30657963Cajanus cajanTriticum dicoccoides32.433085.7184forward
CNT30612607Cajanus cajanArabis alpina43.6320.9687.61113forward
CNT303716Cajanus cajanZea mays35.1432.8582.4291forward
CNT30651400Cajanus cajanRosa chinensis92.2849.2887.03239forward
CNT30126375Cajanus cajanCorymbia citriodora69.1154.7484.92179forward
CNT3053136Cajanus cajanAmborella trichopoda22.7813.4191.5359forward
CNT30329735Cajanus cajanDioscorea rotundata55.2144.4185.31143forward
CNT30496219Cajanus cajanDigitaria exilis35.1440.2783.5291forward
CNT30725037Cajanus cajanLupinus angustifolius50.5815.2990.08131forward
CNT3050430Cajanus cajanCucumis sativus86.4963.185.71224forward

Expression of CNT30619887

Peptides detected in this lncRNA

>peptide 1 (84 aa)
RAKRLSIGPVPVYMCWNQAPITANMANLPFFISLVLNSFIFSGEPLPHPSGSNQSPPGYPTSVPVSLLLGKMGSVFTHPGFIMSA

Sequence

>CNT30619887
CTAGGGCAAAAAGGTTGTCAATAGGACCAGTGCCGGTGTATATGTGCTGGAACCAAGCACCCATCACAGCCAACATGGCCAATCTCCCATTCTTTATCTC
CTTAGTTCTCAACTCCTTTATCTTCTCGGGAGAACCACTTCCCCATCCGAGTGGGTCAAACCAAAGCCCACCTGGGTACCCAACATCGGTTCCTGTGAGC
TTGTTGTTGGGAAAGATGGGGTCAGTGTTCACACACCCGGGCTTTATTATGTCGGCCCA