Detailed information on CNT30189291


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 9e-102

BLAST vs NONCODE:
NONMTRT002043, E-value = 1e-57

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30304338Secale cerealeTriticum aestivum84.15100.6491.46632forward
CNT30396078Secale cerealeTriticum turgidum85.753493.17644forward
CNT30253358Secale cerealeAvena sativa61.6556.8893.95463forward
CNT30666357Secale cerealeTriticum dicoccoides76.0368.5593.17571forward
CNT30460849Secale cerealeSaccharum spontaneum61.2578.3690.22460forward
CNT30127456Secale cerealeCorymbia citriodora60.7257.4390.57456forward
CNT30686718Secale cerealeTriticum urartu76.0326.1693.17571forward
CNT30722325Secale cerealeTriticum spelta63.2561.8596.21475forward
CNT30580899Secale cerealeEchinochloa crusgalli61.6595.8690.5463forward
CNT30592842Secale cerealeEragrostis curvula61.2556.5891.3460forward

Expression of CNT30189291

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MPSLSWILALTLSMVSELSTSRVMVLPVRVFTKICI

>peptide 2 (38 aa)
IKIIARSKQQTSKQFKHKIQNQQQLGQADLSEVHLFIT*

>peptide 3 (30 aa)
MNEKTVKINDRAPPTRRPRINQQVRRQGNY*

>peptide 4 (53 aa)
MPSLSWILALTLSMVSELSTSRVMVLPVRVFTKICMPPRKRSTRWRVDSFWML*

Sequence

>CNT30189291
ATATTAAGATCATTGCCAGATCAAAACAGCAAACAAGCAAGCAATTCAAGCACAAGATACAAAACCAACAGCAATTAGGGCAAGCAGATTTATCTGAAGT
TCACTTATTCATTACTTAACGATACTGCTTTTCCAGAAACGGTTTCAACCAACAGATAACACGCGGACTCGATAGTTCATTAAACCAACACATAGGACTG
ACATGAACGAGAAAACAGTTAAAATAAACGACAGGGCACCACCGACCAGACGACCCAGGATAAACCAGCAGGTCCGACGCCAGGGCAATTACTGACCACC
ACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCCGCAAGGGTACGTCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGC
TGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGCTCTCAACCTCCAGAGTGATGGTCTTGCCGGTGA
GGGTCTTCACGAAGATCTGCATGCCACCACGCAAGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTACGGCCATCCTC
CAGCTGCTTGCCAGCAAAGATCAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGCTCTCA
ACCTCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATC