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Detailed information on CNT30592842


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 1e-100

BLAST vs NONCODE:
NONMEST001181, E-value = 5e-103

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30189291Eragrostis curvulaSecale cereale56.5861.2591.3460forward
CNT30299711Eragrostis curvulaTriticum aestivum56.5857.7992.39460forward
CNT30396078Eragrostis curvulaTriticum turgidum56.5824.2991.96460forward
CNT30253560Eragrostis curvulaAvena sativa56.5864.1693.04460forward
CNT30665165Eragrostis curvulaTriticum dicoccoides56.5857.5792.39460forward
CNT30461506Eragrostis curvulaSaccharum spontaneum56.5838.6992.39460forward
CNT30141602Eragrostis curvulaLolium perenne56.5866.5793.91460forward
CNT3067610Eragrostis curvulaLeersia perrieri56.5825.8691.52460forward
CNT30345725Eragrostis curvulaEragrostis tef73.8101.5291.17600forward
CNT30107357Eragrostis curvulaOryza longistaminata56.5861.5891.74460forward
CNT30580899Eragrostis curvulaEchinochloa crusgalli56.5895.2493.7460forward
CNT30116053Eragrostis curvulaOryza nivara56.5865.4391.52460forward
CNT30557382Eragrostis curvulaPanicum hallii55.663.6691.81452forward

Expression of CNT30592842

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MRRCWSGGMPSLSWILAFTLSMVSELSTSRVMVLPVKVFTKICIPPLRRSTRWRVDSFWML*

>peptide 2 (75 aa)
MEPNSTTTQPTSLTSKRTPFRTPDIIGTRRPRYSSSFNQRSTDHHGGGAPGGGWTPSGCCSQQGCGRPPAACQRR*

>peptide 3 (42 aa)
MSLCWSGGMPSLSWILALTLSMVSEDSTSRVMVLPVRVFTKIC

Sequence

>CNT30592842
CTAGCACACGGCCATAACAGAACTAATAAAATTCGGATGAAACTGAACAGAGCACAAAAAAACCTAATCAATCCACAAGAATAATTTCACTAGTAGCACC
AACCATAACAGAATTAAAAATCAGACAGATGAAACTGAACAGAGCACAAATATAGTTCAAACGTCACTTATTAAACTGCTGCACCTCTGCAATTGTTTCT
GAGTACGACATAACCACAAAGGACTCAGTACATGGAACCAAACAGCACTACGACACAACCCACAAGCTTAACTTCAAAGAGGACACCCTTCAGGACACCA
GATATCATAGGCACCAGGCGACCAAGGTACAGCAGCAGCTTCAACCAGCGTTCTACTGACCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTT
CTGGATGTTGTAGTCAGCAAGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGGATC
TTGGCCTTCACATTGTCAATGGTGTCTGAGCTCTCAACCTCCAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCATCCCACCCCTCAGGC
GGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGGTC
CGGGGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCGGAGGATTCCACCTCGAGGGTGATGGTCTTGCCGGTTAGGGTCTTC
ACAAAGATCTGCA