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Detailed information on CNT30304338


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 6e-96

BLAST vs NONCODE:
NONMEST001181, E-value = 4e-69

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30189291Triticum aestivumSecale cereale100.6484.1591.46632forward
CNT30396078Triticum aestivumTriticum turgidum94.2731.2692.23592forward

Expression of CNT30304338

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MRRCWSGGMPSLSWILALTLSMVSDDSTSRVMVLP

>peptide 2 (44 aa)
MPSLSWILALTLSMVSELSTSRVMVFPVRVFTKICMPPRRRRTR*

Sequence

>CNT30304338
ATCTGAAGTTCACTTATTCATTACTTAACGATACGCCAGCAACAGTTTCAACCAACAGATAACATGGGGACTCCATAGTTCATAAAACCAACACATAGGA
CTGACACGAACGAGAAAACAGTTCAAATGAACGACAAGGCACCACCGACCGGACGAAAAAGGATAAACCAGCAGGTCCAACGCCAGGGCAATTACTGACC
ACCGCGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCCGCGAGGGTACGACCGTCCTCCAGCTGCTTGCCAGCGAAGATAAGG
CGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCTATGGTGTCGGAGCTCTCAACCTCCAGAGTGATGGTCTTCCCAG
TGAGGGTCTTCACGAAGATCTGCATGCCACCACGCAGACGCAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTCCCGTC
CTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGACGAC
TCCACCTCAAGGGTGATGGTCTTGCCCG