Detailed information on CNT30666357


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-101

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-98

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30189291Triticum dicoccoidesSecale cereale68.5576.0393.17571forward
CNT30301639Triticum dicoccoidesTriticum aestivum62.6799.8196.93522forward
CNT30396078Triticum dicoccoidesTriticum turgidum75.1533.0596.81626forward
CNT30253560Triticum dicoccoidesAvena sativa55.764.7193.53464forward
CNT30686718Triticum dicoccoidesTriticum urartu99.5237.9898.91829forward
CNT30364225Triticum dicoccoidesSorghum bicolor56.4261.7690.21470forward

Expression of CNT30666357

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPSLSWILALTLSIVSELSTSRVMVLPVRVFTKICMPPRRRSTRWRVDSFWML*

>peptide 2 (44 aa)
QIKTASKQLKHNIQNQQQIRAISEVHLFITYNDTDVPATVSTNR*

>peptide 3 (53 aa)
MRRCWSGGMPSLSWILALTLSMVSELSTSRVMVLPVRVFTKICICREEYQTEW*

>peptide 4 (53 aa)
MCQQRFQPTDSSLNQRSRTDTGIRQFSNQHSRTHTNEKTVLLNDRAPPTGRPG*

Sequence

>CNT30666357
CCAGATCAAAACTGCAAGCAAGCAATTGAAGCACAATATACAAAACCAACAGCAAATAAGAGCAATATCTGAAGTTCACTTATTCATTACTTATAACGAT
ACTGATGTGCCAGCAACGGTTTCAACCAACAGATAGTTCGCTAAACCAACGCAGTAGGACTGACACGGGGATTCGACAGTTTTCAAACCAACACAGTAGG
ACTCACACGAACGAGAAAACAGTTCTACTGAACGACAGGGCACCGCCCACCGGACGACCAGGATAAACCAGCAGCTCAAACGACAGGGCAATTACTGACC
ACCGCGAAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCGAGGGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAGG
CGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATTGTGTCGGAGCTCTCAACCTCCAGGGTGATGGTCTTGCCGG
TGAGGGTCTTCACGAAGATCTGCATGCCACCACGCAGGCGCAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGGCCATC
CTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCTATGGTGTCGGAGCTC
TCAACCTCTAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATCTGCAGAGAAGAATACCAAACAGAATGGTAAGCCTCAAGAAGCAAAC
TGATATGATGAAGACTACTACATAAATAAATAA