Detailed information on CNT30686718


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-95

BLAST vs NONCODE:
NONMTRT002043, E-value = 2e-64

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30189291Triticum urartuSecale cereale26.1676.0393.17571forward
CNT30666357Triticum urartuTriticum dicoccoides37.9899.5298.91829forward
CNT30127456Triticum urartuCorymbia citriodora21.2658.4491.38464forward
CNT30722325Triticum urartuTriticum spelta21.9962.595.42480forward
CNT30107357Triticum urartuOryza longistaminata21.2161.9890.71463forward
CNT30150050Triticum urartuBrachypodium distachyon21.5335.1391.91470forward

Expression of CNT30686718

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MRRCWSGGMPSLSWILALTLSMVSELSTSRVMVLPVRVFTKICICREEYQTEW*

>peptide 2 (72 aa)
MRERIGQQISFPQHQIGAETDQIPQYYTSIQPYNQRRSRRHGERGGKLGTLRRWGRRIRRAWSRSETRLGGDL

>peptide 3 (30 aa)
MSTRDTSGSASGETELPPTRLIQNSTKTKS*

>peptide 4 (30 aa)
MIQHSCRTCLSYRERSLAFSGEINLQSYAY*

>peptide 5 (39 aa)
MHTRLYTAKGVDLNYKQIYVVENKQTAATYFSHYLNDPT*

>peptide 6 (30 aa)
MLIIQGKKTSFLRGNQSTILRLLGRSRYRI*

>peptide 7 (30 aa)
MLIIQRKKPSFLRGNQSTILRLLGRSRYRI*

>peptide 8 (29 aa)
MVDNKQTAAAYFNQMHQKNLKTIYLKDST*

>peptide 9 (53 aa)
MPSLSWILALTLSIVSELSTSRVMVLPVRVFTKICMPPRRRSTRWRVDSFWML*

>peptide 10 (46 aa)
HCQIKTASKQLKHNIQNQQQIRAISEVHLFITYNDTDVPATVSTNR*

>peptide 11 (53 aa)
MCQQRFQPTDSSLNQRSRTDTGIRQFSNQHSRTHTNEKTVLLNDRAPPTGRPG*

Sequence

>CNT30686718
CATTGCCAGATCAAAACTGCAAGCAAGCAATTGAAGCACAATATACAAAACCAACAGCAAATAAGAGCAATATCTGAAGTTCACTTATTCATTACTTATA
ACGATACTGATGTGCCAGCAACGGTTTCAACCAACAGATAGTTCACTAAACCAACGCAGTAGGACTGACACGGGGATTCGACAGTTTTCAAACCAACACA
GTAGGACTCACACGAACGAGAAAACAGTTCTACTGAACGACAGGGCACCGCCCACCGGACGACCAGGATAAACCAGCAGGTCAAACGACAGGGCAATTAC
TGACCACCGCGAAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCTGCGAGGGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAGA
TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATTGTGTCGGAGCTCTCAACCTCCAGGGTGATGGTCTT
GCCGGTGAGGGTCTTCACGAAGATCTGCATGCCACCACGCAGGCGCAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGG
CCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGG
AGCTCTCCACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCTGCAGAGAAGAATACCAAACAGAATGGTAAGCCTCAAGAAG
CAAACTGATATGATGAAGACTACTACATAAATAAGATTCCATACATCACATCATAGTGAATATAAACAAACGGCAGTAGCCATATACTTCCTCCGTCCGG
AAATACTTGTCATCAAAATAGATAAAAGGGGATGTATCTAGACGTATTTTAGTATTTAGGTGCATGCTCATAACCATAAAAAAACTAAAGATTGTTATTC
CATGGAGCTGTCAGACATGCTTATATCATCCAAGGGAAGAAGCCTAGGTTTTTTCCGAGAAAAGTCAATCTACAGATGGTAGATAATAAACAAACGGCAG
CAGCATATTTTAATCAGATGCACCAGAAGAATCTAAAGACCATTTATCTCAAGGATTCCACATAGCTGCCGGACATGCTTATCATCCAAGGAAAAAAGAC
TAGCTTTCTTAGGGGAAATCAATCTACAATCCTACGCCTATTAGGAAGGTCACGGTACAGAATATGAGCACGCGCGACACATCAGGCAGTGCTTCTGGAG
AGACAGAATTACCACCCACAAGGCTAATACAGAATTCGACCAAAACAAAGAGCTAAACGAATCTATCGCGAAGGAGCGGACGAACCAGTACACAAATCAT
GCATACGAGACTATATACGGCTAAAGGAGTTGACCTCAACTACAAACAGATCTATGTGGTAGAGAATAAACAAACGGCAGCAACATATTTTTCTCACTAT
CTCAATGATCCAACATAGAGAAGTCTGTTAGCTTTTTCCGAGAAGCTAACAGACTGTCGCGCAGATGCACCAAAAGAAAAATCTAAAGACCATTTATCTC
AATGATCCAACATAGCTGCCGGACATGCTTATCATACAGAGAAAGAAGCCTAGCTTTCTCAGGGGAAATCAATCTACAATCCTACGCCTATTAGGAAGGT
CTCGGTACAGAATATGAGCACGAGCAACACATCAAGCAGTATAGGAGCGCCTGGAGAGAGAATTACGACAAAAAGCTAATATTGAATTCGACCATAATAA
AGAGTTAAAGACGTATCTATCACATAGGAGCGGACGAACCAGTACATAAATCATGCGTATGAGACTATACGGCTTAAAGAGTTGACCTCGAACACGAACA
GATCTACCCCTTCAATCTACACGCAAAAATCCCTAAGAATTCGCCGAAGCTTCATCGACCTAACATGCGCGAACGGATCGGACAACAAATTTCGTTCCCA
CAGCATCAGATCGGAGCAGAAACCGACCAAATTCCACAATACTACACCTCCATCCAACCATATAATCAACGCCGATCTAGACGACACGGGGAGAGGGGAG
GCAAGCTCGGTACCTTGAGGCGGTGGGGGAGGAGGATTCGACGAGCGTGGAGTCGATCGGAGACGAGATTGGGTGGGGATTTG