SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 8440 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT3090413 Solanum tuberosum 1:65003693-65006177 (+) noncoding (-0.086016)0.00000000001 (sp|G7KEU7|SBT_MEDTR) 32 9.61 2
CNT3090412 Solanum tuberosum 1:16461782-16464116 (+) noncoding (-0.024576)1e-60 (sp|Q06GM9|PETD_PIPCE) 62 306.64 2Conserved counterparts:
CNT3090411 Solanum tuberosum 1:68128994-68132341 (-) noncoding (-0.008192)- 47 4.49 2
CNT3090410 Solanum tuberosum 1:81481589-81494753 (+) noncoding (-0.0004096)- 76 0 2Conserved counterparts:
CNT3090409 Solanum tuberosum 1:24767929-24772623 (-) noncoding (-0.12288)- 96 14.54 5
CNT3090408 Solanum tuberosum 1:59361582-59362674 (-) noncoding (-0.0253952)- 46 8.67 2
CNT3090407 Solanum tuberosum 1:1627370-1627962 (-) noncoding (-0.0004096)- 34 350.21 2
CNT3090406 Solanum tuberosum 1:67344123-67358879 (+) noncoding (-0.022528)- 29 37.36 2
CNT3090405 Solanum tuberosum 1:88126996-88127530 (-) noncoding (-0.0004096)- - 0.29 2
CNT3090404 Solanum tuberosum 1:1351997-1354777 (-) noncoding (-0.0004096)5e-67 (sp|Q5MR23|9DC3_SOLPI) 41 0.54 2
CNT3090403 Solanum tuberosum 1:71477838-71499441 (+) noncoding (-0.0118784)5e-61 (sp|Q9LE33|HPR3_ARATH) 63 29.56 2
CNT3090402 Solanum tuberosum 1:75771714-75772927 (-) noncoding (-0.073728)0.0000000000002 (sp|P24152|EXTN_SORBI) 34 3.1 4
CNT3090400 Solanum tuberosum 1:88283040-88285047 (+) noncoding (-0.0004096)- 35 68.54 4
CNT3090399 Solanum tuberosum 1:63430687-63432605 (-) noncoding (-0.0004096)- 39 8.96 2
CNT3090398 Solanum tuberosum 1:78955135-78963240 (-) noncoding (-0.049152)- 84 5.53 8
CNT3090397 Solanum tuberosum 1:74772919-74774312 (-) noncoding (-0.038912)- 79 74.64 2
CNT3090396 Solanum tuberosum 1:59926290-59926674 (-) noncoding (-0.0004096)3e-35 (sp|Q9SUT2|PER39_ARATH) 39 18.86 1
CNT3090394 Solanum tuberosum 1:22439047-22441944 (-) noncoding (-0.1024)- - 7.21 3
CNT3090393 Solanum tuberosum 1:74976078-74976479 (-) noncoding (-0.0016384)- 60 10.71 2
CNT3090392 Solanum tuberosum 1:84450090-84450743 (-) noncoding (-0.0643072)- 85 40.39 2
CNT3090391 Solanum tuberosum 1:29104252-29105011 (-) noncoding (-0.04096)- 56 6.34 2
CNT3090390 Solanum tuberosum 1:17308600-17310546 (-) noncoding (-0.028672)- 79 34.98 2
CNT3090389 Solanum tuberosum 1:35624735-35632427 (-) noncoding (-0.0004096)- 46 3.5 3
CNT3090388 Solanum tuberosum 1:13627057-13629573 (-) coding (0.063)- - 6.84 4
CNT3090387 Solanum tuberosum 1:35627876-35632449 (-) noncoding (-0.139264)- 32 9.83 3
CNT3090386 Solanum tuberosum 1:42046782-42067844 (-) noncoding (-0.032768)- 66 8.85 2
CNT3090385 Solanum tuberosum 1:60762309-60781607 (+) noncoding (-0.0036864)- 40 2.87 2
CNT3090383 Solanum tuberosum 1:78955189-78962408 (-) noncoding (-0.053248)- 70 5.42 7
CNT3090382 Solanum tuberosum 1:80669406-80679395 (-) noncoding (-0.024576)2e-39 (sp|Q6NPM5|ATS3B_ARATH) 48 0.31 4Conserved counterparts:
CNT3090381 Solanum tuberosum 1:33625258-33625494 (+) noncoding (-0.0004096)- 79 2.21 1
CNT3090380 Solanum tuberosum 1:50981732-50984881 (+) coding (0.083)1e-57 (sp|Q3BAI2|YCX91_PHAAO) 73 2.61 2
CNT3090379 Solanum tuberosum 1:84837750-84838314 (+) noncoding (-0.0004096)- - 8.91 2
CNT3090378 Solanum tuberosum 1:10633043-10633462 (-) noncoding (-0.0151552)0.00000003 (sp|P85955|DRE1_PSEMZ) 44 0.42 2
CNT3090377 Solanum tuberosum 1:59143773-59146188 (-) noncoding (-0.0557056)- 71 5.16 1
CNT3090376 Solanum tuberosum 1:2910997-2922822 (+) noncoding (-0.0004096)- 41 38.64 2
CNT3090373 Solanum tuberosum 1:76010477-76016113 (-) noncoding (-0.032768)- 51 1.87 5
CNT3090372 Solanum tuberosum 1:84086818-84088040 (-) noncoding (-0.110592)- 53 12.63 2
CNT3090371 Solanum tuberosum 1:34740811-34741068 (+) noncoding (-0.129434)- 73 27.83 1
CNT3090370 Solanum tuberosum 1:42733585-42739275 (+) noncoding (-0.0208896)- 69 2.96 2Conserved counterparts:
CNT3090369 Solanum tuberosum 1:35479745-35483283 (-) noncoding (-0.002048)- 92 2.08 5Conserved counterparts:
CNT3090368 Solanum tuberosum 1:61881031-61881659 (+) noncoding (-0.02048)- 63 0.85 2
CNT3090367 Solanum tuberosum 1:79063466-79063979 (-) noncoding (-0.0004096)- 40 8.04 2
CNT3090366 Solanum tuberosum 1:66140492-66141423 (+) noncoding (-0.0004096)2e-60 (sp|Q00874|DR100_ARATH) 77 0.5 2Conserved counterparts:
CNT3090365 Solanum tuberosum 1:79604190-79608466 (+) noncoding (-0.036864)1e-67 (sp|P92999|GL118_ARATH) 41 2.29 2
CNT3090364 Solanum tuberosum 1:82936196-82936698 (+) noncoding (-0.016384)2e-20 (sp|Q7Y214|GTE7_ARATH) 68 0.96 2
CNT3090362 Solanum tuberosum 1:87214834-87215392 (-) noncoding (-0.0135168)9e-76 (sp|P21568|CYPH_SOLLC) 76 848.86 2Conserved counterparts:
CNT3090361 Solanum tuberosum 1:5102208-5103911 (-) coding (0.006)- 56 2.1 2
CNT3090360 Solanum tuberosum 1:74590884-74592225 (+) noncoding (-0.0004096)- 44 8.35 2
CNT3090359 Solanum tuberosum 1:26903497-26904826 (-) noncoding (-0.094208)- 75 12.08 2
CNT3090358 Solanum tuberosum 1:36077269-36079716 (-) noncoding (-0.032768)- 60 1.36 3