SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 8440 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT3090531 Solanum tuberosum 1:65649111-65661441 (-) noncoding (-0.055296)- 32 83.49 2
CNT3090530 Solanum tuberosum 1:52459371-52463626 (-) noncoding (-0.04096)- 99 10.45 2
CNT3090529 Solanum tuberosum 1:23981200-23984421 (-) noncoding (-0.049152)- 59 19.27 4Conserved counterparts:
CNT3090527 Solanum tuberosum 1:60881021-60882479 (+) noncoding (-0.0004096)- 53 4.83 2
CNT3090525 Solanum tuberosum 1:82724525-82739152 (+) coding (0.09)0.0000000002 (sp|Q9SRH7|PBL35_ARATH) 79 9.43 3
CNT3090524 Solanum tuberosum 1:35910136-35915164 (+) noncoding (-0.0290816)- 87 2.27 4
CNT3090523 Solanum tuberosum 1:4170466-4171099 (-) noncoding (-0.0004096)- 79 11.73 2
CNT3090522 Solanum tuberosum 1:39922931-39924417 (+) noncoding (-0.0004096)- 62 3.33 2
CNT3090521 Solanum tuberosum 1:8424847-8425484 (-) noncoding (-0.032768)3e-16 (sp|P92960|KAT3_ARATH) 69 70.61 2
CNT3090520 Solanum tuberosum 1:59168657-59172232 (-) noncoding (-0.147456)- 75 8.48 4
CNT3090519 Solanum tuberosum 1:74975988-74976608 (-) noncoding (-0.086016)- - 12.09 2
CNT3090518 Solanum tuberosum 1:1690703-1695723 (+) noncoding (-0.090112)- 34 32.69 2
CNT3090517 Solanum tuberosum 1:42738670-42739194 (+) noncoding (-0.04096)- 75 1.22 2
CNT3090516 Solanum tuberosum 1:47958511-47965334 (+) noncoding (-0.0385024)- 88 22.1 2
CNT3090515 Solanum tuberosum 1:69127623-69129536 (+) noncoding (-0.0004096)- 62 10.74 1
CNT3090514 Solanum tuberosum 1:75771754-75772913 (-) noncoding (-0.036864)1e-21 (sp|P14918|EXTN_MAIZE) 36 31.14 3
CNT3090513 Solanum tuberosum 1:65024220-65034396 (+) noncoding (-0.0331776)4e-141 (sp|O82777|SBT3_SOLLC) 47 25.95 2
CNT3090512 Solanum tuberosum 1:3626313-3648448 (-) noncoding (-0.08192)3e-32 (sp|Q9CAL3|CRK2_ARATH) 56 0.68 2
CNT3090511 Solanum tuberosum 1:8900276-8901239 (+) noncoding (-0.0004096)- 36 12.31 2
CNT3090510 Solanum tuberosum 1:59361658-59362632 (-) noncoding (-0.0004096)- 46 10.39 2
CNT3090508 Solanum tuberosum 1:75313235-75328611 (-) noncoding (-0.0004096)- 61 2.04 2
CNT3090507 Solanum tuberosum 1:31596867-31600334 (+) noncoding (-0.0004096)- - 4.52 2
CNT3090505 Solanum tuberosum 1:571731-579893 (+) noncoding (-0.0004096)- 64 14.24 5
CNT3090504 Solanum tuberosum 1:86487705-86488115 (-) noncoding (-0.0004096)- - 11.38 2
CNT3090503 Solanum tuberosum 1:22435399-22442019 (-) coding (0.377)- 71 0.55 3
CNT3090502 Solanum tuberosum 1:87006398-87018724 (+) noncoding (-0.0012288)9e-31 (sp|P33081|AX15A_SOYBN) 60 0.49 3Conserved counterparts:
CNT3090501 Solanum tuberosum 1:81423470-81423889 (-) coding (0.084)- 99 18.24 1
CNT3090500 Solanum tuberosum 1:65007510-65031707 (+) noncoding (-0.0004096)3e-56 (sp|O82777|SBT3_SOLLC) 30 0.3 2
CNT3090499 Solanum tuberosum 1:13959811-13960582 (+) noncoding (-0.0004096)- 47 23.47 3
CNT3090497 Solanum tuberosum 1:85592425-85601473 (+) noncoding (-0.0004096)- 76 11.7 2
CNT3090496 Solanum tuberosum 1:76260675-76279736 (-) noncoding (-0.0004096)1e-34 (sp|Q9MAA2|AT74_ARATH) 30 24.13 2
CNT3090495 Solanum tuberosum 1:78691709-78705539 (-) noncoding (-0.0004096)- - 4.68 2
CNT3090494 Solanum tuberosum 1:2154899-2168617 (+) noncoding (-0.0249856)3e-48 (sp|O24370|LOX21_SOLTU) - 212.59 2
CNT3090493 Solanum tuberosum 1:70310157-70310769 (+) coding (0.115)6e-16 (sp|Q1G3Q4|RITF1_ARATH) - 6.15 2
CNT3090492 Solanum tuberosum 1:53584444-53592676 (-) noncoding (-0.0004096)- 44 17.27 3
CNT3090491 Solanum tuberosum 1:68265031-68288723 (-) noncoding (-0.0004096)- - 15.69 4
CNT3090490 Solanum tuberosum 1:26847890-26854511 (+) noncoding (-0.049152)- 63 13.27 2
CNT3090489 Solanum tuberosum 1:88017181-88034120 (-) noncoding (-0.086016)2e-52 (sp|Q9T003|ASMT_ARATH) 51 14.19 2
CNT3090488 Solanum tuberosum 1:35921325-35922500 (-) noncoding (-0.0004096)- 52 20.96 3
CNT3090487 Solanum tuberosum 1:45403762-45404196 (-) noncoding (-0.0004096)- 51 70.62 2
CNT3090486 Solanum tuberosum 1:68893081-68893484 (+) noncoding (-0.0004096)- - 75.6 2
CNT3090485 Solanum tuberosum 1:85353887-85359035 (-) noncoding (-0.0004096)- 81 430.77 2
CNT3090482 Solanum tuberosum 1:20414598-20420713 (+) noncoding (-0.016384)- 86 24.82 4
CNT3090481 Solanum tuberosum 1:11676984-11678483 (-) noncoding (-0.0004096)- 69 17.57 2
CNT3090479 Solanum tuberosum 1:1336568-1362088 (-) noncoding (-0.0004096)0 (sp|Q5MR23|9DC3_SOLPI) 92 0.3 2Conserved counterparts:
CNT3090477 Solanum tuberosum 1:81914255-81916255 (-) noncoding (-0.0004096)- 57 1.85 2
CNT3090476 Solanum tuberosum 1:75122228-75127492 (+) noncoding (-0.0086016)3e-84 (sp|Q9LIK7|ACA13_ARATH) 90 6.58 6Conserved counterparts:
CNT3090475 Solanum tuberosum 1:81914246-81916200 (-) noncoding (-0.0004096)- 57 2.21 3
CNT3090474 Solanum tuberosum 1:81489048-81491250 (+) noncoding (-0.0004096)- 45 6.47 4
CNT3090473 Solanum tuberosum 1:87004390-87018724 (+) noncoding (-0.0012288)1e-31 (sp|P33081|AX15A_SOYBN) 60 2.1 2Conserved counterparts: