SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 8440 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT3090237 Solanum tuberosum 1:2094296-2105000 (-) noncoding (-0.0004096)- 69 57.54 2
CNT3090236 Solanum tuberosum 1:77840492-77842099 (+) noncoding (-0.0684032)- 36 6.45 3
CNT3090235 Solanum tuberosum 1:2740119-2741001 (+) noncoding (-0.0004096)- 47 2.7 2
CNT3090233 Solanum tuberosum 1:1217437-1237272 (-) noncoding (-0.176128)- 54 8.43 2
CNT3090232 Solanum tuberosum 1:73455613-73456210 (-) noncoding (-0.12288)2e-19 (sp|F4HS99|REC1_ARATH) 74 8.45 2
CNT3090230 Solanum tuberosum 1:84929136-84941336 (-) noncoding (-0.114688)4e-52 (sp|I4DST9|TCEA2_TULGE) 50 2.63 2Conserved counterparts:
CNT3090229 Solanum tuberosum 1:78955189-78962240 (-) noncoding (-0.090112)- 60 7.01 5
CNT3090228 Solanum tuberosum 1:8503677-8504295 (-) noncoding (-0.0004096)- - 9.12 2
CNT3090227 Solanum tuberosum 1:42733602-42734141 (+) noncoding (-0.0278528)- 69 2.81 2
CNT3090226 Solanum tuberosum 1:82253322-82255048 (+) noncoding (-0.0004096)- 39 10.07 1
CNT3090225 Solanum tuberosum 1:65018962-65023365 (+) noncoding (-0.0004096)1e-107 (sp|O82777|SBT3_SOLLC) 33 10.54 2
CNT3090224 Solanum tuberosum 1:2399041-2400265 (+) noncoding (-0.356352)- 46 20.56 1
CNT3090223 Solanum tuberosum 1:17683663-17686796 (+) noncoding (-0.14336)- 44 23 1
CNT3090222 Solanum tuberosum 1:20430134-20440745 (-) noncoding (-0.262144)- 94 10.96 2
CNT3090221 Solanum tuberosum 1:35479722-35483319 (-) coding (0.003)- 92 6.22 5Conserved counterparts:
CNT3090219 Solanum tuberosum 1:14644277-14655039 (-) noncoding (-0.0086016)- 78 3.53 6
CNT3090218 Solanum tuberosum 1:3934225-3934611 (+) noncoding (-0.148685)5e-28 (sp|Q9LT15|STP10_ARATH) 38 3.48 2
CNT3090217 Solanum tuberosum 1:26064986-26066021 (-) noncoding (-0.0483328)- 78 5.48 2
CNT3090216 Solanum tuberosum 1:78378895-78379641 (-) noncoding (-0.0106496)- 55 4.54 2
CNT3090215 Solanum tuberosum 1:60933516-60941807 (+) noncoding (-0.0090112)1e-29 (sp|P0C2F6|RNHX1_ARATH) 80 15.11 3
CNT3090214 Solanum tuberosum 1:57729574-57729889 (+) noncoding (-0.0004096)- 30 14.38 2
CNT3090213 Solanum tuberosum 1:84022312-84022618 (-) noncoding (-0.0004096)- - 13.74 1
CNT3090212 Solanum tuberosum 1:76316188-76322437 (-) noncoding (-0.0004096)0.00000004 (sp|Q9LRW9|RLP40_ARATH) 42 12.64 2
CNT3090211 Solanum tuberosum 1:56932352-56934679 (+) noncoding (-0.008192)- 100 57.56 2Conserved counterparts:
CNT3090210 Solanum tuberosum 1:37930824-37937264 (+) noncoding (-0.0004096)- 31 15.21 3
CNT3090208 Solanum tuberosum 1:50996494-50999259 (-) noncoding (-0.0004096)- 46 10.16 2
CNT3090207 Solanum tuberosum 1:88274769-88277844 (+) noncoding (-0.0733184)- 91 15.95 4
CNT3090206 Solanum tuberosum 1:80452757-80453019 (-) noncoding (-0.0004096)- - 8.96 1
CNT3090205 Solanum tuberosum 1:36077190-36079720 (-) noncoding (-0.192512)- 61 1.23 2
CNT3090204 Solanum tuberosum 1:7349022-7353618 (-) noncoding (-0.126976)9e-18 (sp|P85524|KIRO_ACTDE) 35 1.69 2
CNT3090203 Solanum tuberosum 1:4469554-4471117 (-) noncoding (-0.045056)- 40 12.42 2
CNT3090202 Solanum tuberosum 1:1335348-1370518 (-) noncoding (-0.0638976)2e-130 (sp|Q40235|CF9_SOLPI) 48 1.63 3Conserved counterparts:
CNT3090201 Solanum tuberosum 1:42046782-42047515 (-) noncoding (-0.02048)- 66 13.32 2
CNT3090200 Solanum tuberosum 1:88412977-88413198 (-) noncoding (-0.0004096)- 74 9.61 1
CNT3090199 Solanum tuberosum 1:80669798-80672949 (-) noncoding (-0.053248)- 33 19.65 2Conserved counterparts:
CNT3090198 Solanum tuberosum 1:24012674-24022156 (+) noncoding (-0.0004096)- 30 13.39 3
CNT3090197 Solanum tuberosum 1:4446641-4456010 (-) noncoding (-0.0004096)0.000007 (sp|P0C5E2|LRL12_ARATH) - 3.34 2
CNT3090196 Solanum tuberosum 1:14508270-14510793 (-) noncoding (-0.142131)- 69 3.3 1
CNT3090195 Solanum tuberosum 1:72464060-72477972 (+) noncoding (-0.0004096)- 33 4.08 2
CNT3090194 Solanum tuberosum 1:5945802-5950160 (+) noncoding (-0.0004096)- 55 6.46 2
CNT3090193 Solanum tuberosum 1:8246816-8268972 (-) noncoding (-0.0004096)- 38 271.3 2
CNT3090191 Solanum tuberosum 1:69570514-69590922 (-) noncoding (-0.02048)- 48 2.08 2
CNT3090190 Solanum tuberosum 1:68262685-68288660 (-) noncoding (-0.0004096)- - 0 2
CNT3090189 Solanum tuberosum 1:75385694-75391240 (+) noncoding (-0.630784)- 64 14.78 2Conserved counterparts:
CNT3090188 Solanum tuberosum 1:49225858-49227799 (+) noncoding (-0.0004096)- 41 5.07 2
CNT3090187 Solanum tuberosum 1:87214961-87215573 (-) coding (0.052)4e-75 (sp|P21568|CYPH_SOLLC) 98 7.8 2Conserved counterparts:
CNT3090186 Solanum tuberosum 1:76010477-76016169 (-) noncoding (-0.0004096)- 74 8.45 4
CNT3090185 Solanum tuberosum 1:63687646-63691341 (-) noncoding (-0.069632)- 62 11.36 2
CNT3090184 Solanum tuberosum 1:4252303-4253163 (-) noncoding (-0.0004096)- 42 15.05 2
CNT3090183 Solanum tuberosum 1:81730826-81734358 (-) noncoding (-0.0004096)- 69 5.67 1Conserved counterparts: