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Detailed information on CNT3084502


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523916Vigna radiataSetaria italica11.4920.2782.71133forward
CNT30318337Vigna radiataCorylus avellana15.257.786.93176forward
CNT30548454Vigna radiataIpomoea triloba6.3932.0385.1474forward
CNT30514102Vigna radiataJuglans regia25.8233.5284.62299forward
CNT30378440Vigna radiataArabidopsis thaliana6.6526.4684.4277forward
CNT30727458Vigna radiataCorchorus capsularis21.0737.8386.89244forward
CNT30382125Vigna radiataManihot esculenta23.8372.4482.97276forward
CNT30708612Vigna radiataGlycine max19.0885.3386.88221forward
CNT30538066Vigna radiataBrassica napus9.6720.8682.14112forward
CNT30173073Vigna radiataTrifolium pratense29.7173.8288.66344forward
CNT30571440Vigna radiataVitis vinifera29.1978.7984.91338forward
CNT3036031Vigna radiataCucumis melo22.843.8581.44264forward
CNT30551403Vigna radiataOryza brachyantha19.0839.1281.45221forward
CNT30726108Vigna radiataLupinus angustifolius19.8626.0592.61230forward
CNT3064891Vigna radiataSelaginella moellendorffii5.9620.9785.5169forward

Expression of CNT3084502

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MQQPHAFNSLTDTNYRDVRKKLELGNISYNMTLQAIVLKYE*

>peptide 2 (37 aa)
FIFIIKFFSCKKLIEAINFEPEPLFVHMVGVENCTET*

>peptide 3 (67 aa)
MRNSPQPGLCLRSRSRRHWRRSLLLPLELQLQGLELVLTHAFLHSFALLVHLIQQPFSLLCLEGSSE*

Sequence

>CNT3084502
GTTTATATTCATTATCAAATTCTTTTCATGCAAGAAACTAATCGAAGCCATCAATTTTGAACCGGAACCTTTATTTGTTCACATGGTTGGAGTTGAGAAC
TGCACAGAGACTTGATCTCAAAAAATGAGAAAAGTAAACAAAATCACATTAGAAAGGTGTTTTTTTTCTTCAATGTTGTATTGTCTTTTCAATAATAGCT
ATAAACTTTAACGATCAATGCCTTCAATTTTGTCTTCCACCTCCGAATACAACTGCCTGAGCTTCTCGATATTCTCTTCTGCAGTTTCCCAGTAACCACG
TCCATTGGCTTCCAAGAATGTCTGCACCAGCTTCCTGAAGGAGTTTGGATTAGTGTTCATGAGCTTGTTCAGCATTTGCTCATCTTGAATGAAAGTTGTG
TTGGCTTCTTCGTACACCCAGTTGTCAACTTGGCCTGAAGTTGCACTCCATCCCACTGTATTGGGAAATTTCTGATGAATCAAGGTTTTGGAATGTGGCA
TCTGCTGTGCTGAGAGCCATCTCAAAAACTTTTCTTTTCTCAGTCATGCCAGCACCAGGGGCATCACAATCAAAGGCAAAAGACTTTCTGCTAAGATACA
TGTCCTGAAGCTGCTTCTCATCATTCCATGAGGAATTCTCCACAGCCAGGTTTATGTTTGAGGAGTAGGAGCCGGAGGCATTGGAGAAGATCCTTGTTGC
TGCCTCTCGAACTTCAACTCCAAGGGCTTGAGCTTGTTCTAACGCATGCTTTCTTACATAGTTTTGCTCTGCTGGTTCATCTAATTCAGCAACCATTTTC
ACTGCTCTGTCTAGAAGGTTCATCTGAGTAATGAATAGATAAATAAATAAATGAGCAACCAAAGCAATGTAGCAACAAACAGCCTAATAAAATAAATATA
ACAAAGTTCTTGTGTAAACTTTTAACTCGATCGTCATCAGGGTTTTTGATGCAGCAACCTCACGCTTTCAATTCTTTGACGGATACTAATTATCGAGATG
TGAGAAAAAAGTTGGAACTCGGAAATATTTCCTATAATATGACTCTTCAAGCAATCGTTTTAAAATATGAATAGTGCAACTGCAAGTTGCAATTCTGAAC
AAATAATGACAATATTTCACAAAATGATGTAACACGAGGAATACTAAATTGGTCTAAA