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Detailed information on CNT3064891


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676056Selaginella moellendorffiiSetaria viridis23.46.5488.3177forward
CNT30523832Selaginella moellendorffiiSetaria italica23.410.5388.3177forward
CNT3084502Selaginella moellendorffiiVigna radiata20.975.9685.5169forward
CNT30173073Selaginella moellendorffiiTrifolium pratense20.9714.8185.5169forward
CNT3017375Selaginella moellendorffiiZea mays22.498.4289.1974forward
CNT30681154Selaginella moellendorffiiTriticum urartu23.410.1484.4277forward

Expression of CNT3064891

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MRVAASRTSTPRLLACSSTCLRTKFCSAGSSSSATIFTARSSKF

>peptide 2 (54 aa)
VVADVSEGDLRRVEVLESRVCRCQSRFEDLALLAHPRAWGVGVEGEGFPRQVDV*

Sequence

>CNT3064891
AAGTAGTGGCTGACGTCAGTGAGGGAGATCTCCGACGAGTCGAGGTTCTGGAAAGTCGCGTCTGCCGTTGCCAGAGCCGCTTCGAAGATCTTGCGCTTCT
CGCTCATCCCCGCGCCTGGGGTGTCGGAGTCGAAGGCGAAGGATTTCCTCGTCAGGTTGACGTTTGAGGAGTAAGAGCCCGAGGCGTTGGAGAAGATGCG
TGTTGCAGCTTCGCGAACTTCCACGCCGAGGCTCTTGGCCTGCTCCAGCACATGCTTGCGGACGAAGTTTTGCTCTGCAGGCTCGTCCAGCTCTGCGACC
ATCTTCACTGCTCGATCGAGCAAATTCAT