Detailed information on CNT30318337


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676694Corylus avellanaSetaria viridis49.5121.3382.78151forward
CNT30523832Corylus avellanaSetaria italica49.5120.6682.78151forward
CNT30710365Corylus avellanaGlycine max33.7749.7683.5103forward
CNT3084502Corylus avellanaVigna radiata57.715.286.93176forward
CNT30248696Corylus avellanaAvena sativa52.7911.5280.75161forward
CNT30726206Corylus avellanaLupinus angustifolius75.7422.5682.68231forward

Expression of CNT30318337

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MKVELASSYTQLSTWPEVALHPTVFDLGQQRQWAPCLRQAPAEQLAKLPE

>peptide 2 (34 aa)
LQLRSTTALVSQCSVRKYPSTHVHWLPEKSAPTS*

>peptide 3 (50 aa)
STSEYNCFSLSMFCSEVSQYPRPLASRKVCTNFLKEFGFVFISLFNISSS*

Sequence

>CNT30318337
CTTCAACTTCGGAGTACAACTGCTTTAGTCTCTCAATGTTCTGTTCGGAAGTATCCCAGTACCCACGTCCATTGGCTTCCAGAAAAGTCTGCACCAACTT
CCTGAAGGAGTTTGGATTTGTCTTCATCAGCCTATTCAACATCTCCTCATCTTGAATGAAAGTCGAATTGGCCTCTTCATACACCCAATTGTCGACTTGG
CCAGAAGTTGCACTCCACCCAACTGTATTTGATCTCGGCCAGCAAAGACAATGGGCTCCATGCCTCCGTCAAGCTCCGGCAGAGCAACTTGCAAAGCTAC
CTGAA