Detailed information on CNT30145936


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LI74|CHUP1_ARATH, E-value = 2e-19

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30525281Medicago truncatulaPhaseolus vulgaris50.1550.0881.04327forward
CNT30628846Medicago truncatulaVigna unguiculata47.5551.6781.61310forward
CNT30708109Medicago truncatulaGlycine max44.0258.5783.97287forward
CNT3087893Medicago truncatulaVigna radiata35.1252.6481.22229forward
CNT30171601Medicago truncatulaTrifolium pratense53.9961.5489.2352forward
CNT30621275Medicago truncatulaCajanus cajan47.798.1182.96311forward
CNT30120419Medicago truncatulaCitrus clementina18.2524.0983.19119forward

Expression of CNT30145936

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MNNWLLLYFRKFRWQRYIRSLSFYLGHIQT*

>peptide 2 (37 aa)
DLFSISPIMLFLASDVLPVEETNKEEVSFFASRFIND*

>peptide 3 (78 aa)
MCCPLKKLTRKKYPSLLPVSSMIDKIQLTVEHGELCRHPLLLLIGLLEEAVEEAVHLVEEEEEWMEQMVFHSQDLSLC*

>peptide 4 (46 aa)
MDGADGIPFAGFEFVLTEPPPDGLGGGLGTRVGLFSMSANFILLMV*

Sequence

>CNT30145936
GATCTATTCTCAATTTCCCCAATCATGTTGTTCCTAGCATCAGATGTGTTGCCCGTTGAAGAAACTAACAAGGAAGAAGTATCCTTCTTTGCTTCCCGTT
TCATCAATGATTGATAAAATTCAACTAACTGTGGAGCACGGTGAACTTTGTCGTCATCCGCTGCTCCTTTTGATAGGCCTCTTGGAGGAGGCGGTGGAGG
AGGCGGTCCACCTGGTGGAGGAGGAGGAGGAATGGATGGAGCAGATGGTATTCCATTCGCAGGATTTGAGTTTGTGCTAACAGAACCACCACCTGATGGT
TTAGGAGGTGGCCTTGGTACCCGAGTAGGCCTTTTCTCAATGTCGGCAAACTTTATCTTGCTAATGGTTTGATTTTCAACATTCTTTCCATCCTCAGATT
GATCATTTGAACTAGCATGAACAATTGGCTTCTCCTTTATTTTAGAAAGTTTAGGTGGCAAAGATATATTAGGTCTCTCTCTTTCTATCTTGGTCATATT
CAAACTTGAACTGTTCCCAAACTTCTGAACCCTTGCTTTCTCCGCCTTTTCTTTTAGATCGCTCTCCCTAGCCATGGCCAATTTATGGCGATCTTTATAC
GCAGGGTACTTTTCGTCTACAGACGCATCAACTGATGACTTGGACATCAAAT