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Detailed information on CNT30171601


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30525199Trifolium pratensePhaseolus vulgaris61.1957.9579.43350forward
CNT30628846Trifolium pratenseVigna unguiculata57.3454.6781.71328forward
CNT30708285Trifolium pratenseGlycine max47.243.9781.85270forward
CNT3087893Trifolium pratenseVigna radiata40.0352.6482.1229forward
CNT30145936Trifolium pratenseMedicago truncatula70.2861.6689.05402forward
CNT30621275Trifolium pratenseCajanus cajan38.8170.0384.23222forward

Expression of CNT30171601

Peptides detected in this lncRNA

>peptide 1 (38 aa)
VDLFSISPIMLLLASEVLPPVEEINNVVSFFASRFIND*

Sequence

>CNT30171601
GTTGATCTATTCTCAATTTCCCCAATCATGTTGCTCCTGGCATCAGAGGTGTTACCACCCGTTGAAGAAATTAATAATGTAGTATCCTTCTTTGCCTCCC
GTTTCATCAACGATTGATAAAACTCAACCAACTGTGGAGCTCGGTGAACTTTNNNNNNNNNNNNNNNNGGTGGAGGAGGCGGTCCACCAGGGGGACGAGG
AGGAGGAGGAATTGATGGAGCAGACGGTATTCCATTTGCAGGATTTGAATTTGTGCTAACGGAACCACCACCAGAGGGTTTAGGAGGTGGCCTAGGCACC
CGAGTAGGCCTTTTTTCAATTTCAATAAGCTTCATCTTGCTAACGTTTTGATTTTCAACATTCTTCCCATCCTCAGATTGATCACTTGGACTAATAGGAA
CAATTGGCTTTTCCTTTATTTGAGAAAGTTTAGGTGGCAAAGATATATTAGGTCTGTCTCTTTCAGTCTTGGTCATATTTAAATTTGAACTATTACCAAA
CTTTTGCGCTCTTGCTTTCTCTGCCTTCTCTTTTAGATCGCTCTCCCTAGCCATGGCCAATTTATGGCGATC