« Back to Gossypium raimondii search


Detailed information on CNT30609565


BLAST search results

BLAST vs Swiss-Prot:
sp|P49168|RR12_PINCO, E-value = 7e-15

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550041Gossypium raimondiiIpomoea triloba50.331.2282.3418forward
CNT30730673Gossypium raimondiiCorchorus capsularis70.2887.9594.86584forward
CNT30401817Gossypium raimondiiBeta vulgaris22.3876.2382.26186forward
CNT30200527Gossypium raimondiiPisum sativum10.5921.5787.588forward
CNT30711983Gossypium raimondiiGlycine max16.2529.2885.93135forward
CNT30542072Gossypium raimondiiBrassica napus23.9516.4988.44199forward
CNT30235691Gossypium raimondiiBrassica oleracea23.9530.986.43199forward
CNT30556069Gossypium raimondiiOryza glaberrima16.4945.2186.13137forward
CNT3060121Gossypium raimondiiArabidopsis lyrata25.0321.3887.5208forward
CNT30599240Gossypium raimondiiFraxinus excelsior24.0748.1984.5200reverse complement
CNT3018189Gossypium raimondiiZea mays22.7470.5284.66189forward
CNT3021978Gossypium raimondiiPopulus trichocarpa22.8657.490190reverse complement

Expression of CNT30609565

Sequence

>CNT30609565
GGATAAATAAATAGTGGGTTCCATCGTTTCTATGGTTACTTCTTAAACGGTGAGGTCCTCTCTATACACCAGAGCTTATTCCTTCATTTAATTGGTAACT
TGTACAGTTCACACTTTTCGGCACTACTCATAAATTTTCCAGTAATAGATCTTTCACAATGAGATCTACTTATACAGTAACGGTATATAAGGATGAGGAT
TAATTGGGCAGCTGACCCTGTTAGTCCATTCTTTGCAAGAGTCGAAACATAATCTTTTTGCTTTTTAAATAGGATTTTCCCCGCTTAATGGATAAGCATT
TGCTACCAATGGGGAATTTTTTCTCATCTTAAATTCCAAGATTGGATTTGCGCCAATGGAAACCATAAATTTCATACACAATAGAAGGATATGGTAGATC
TATCTTTTTTAGATAGTGAACGGACGAACCCCATTCTATTCACTGGTATGGATCGTTGATACTGAAAAAGTTGTTTCTTTTTTCTCAGCCCATGATCTGA
ACAAGTCGCACATACACCCTAGTACATGTTCCTCGGCGCTGAGGACATCCCCCAAGAGCAGGGGATTTCGTGACATTTCTAATTGGCTGTCTTGCATTTC
TAATAAGTTGTTTAATAGTTGGCATACTGAATCATATACATAATAGACTGGTTTAGATCGATCCTAACCAGATGATTCTGAATTACTTCTTTTTCTATTT
AATAGATTAATAAAATATTAACCCCTTAGGCTTAAGTTAAGAAGGAAAGGAAGAAGAGGGATTAAATCAATCTTAATAAAATTGTGGATTGGTGTTAAAT
CGTTGCTATTGCTATTTGTTATTTAACTTAT