Detailed information on CNT30200527


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30609565Pisum sativumGossypium raimondii21.5710.5987.588forward
CNT3021978Pisum sativumPopulus trichocarpa21.8126.8989.8989reverse complement

Expression of CNT30200527

Peptides detected in this lncRNA

>peptide 1 (37 aa)
TVRIGCLVFLISCFLVGMVNHIHNELVSINPNPIISI*

Sequence

>CNT30200527
TACAGTCCGGATTGGCTGTCTTGTGTTTCTAATAAGTTGTTTTCTAGTTGGCATGGTGAATCATATACATAATGAGCTGGTTTCGATCAATCCTAACCCA
ATAATTTCGATTTAGAATTTATTCGACTCTATTAAATCTGGTTGTTAAGACAATTAAAAAGATAAAAGACAACATCAATTCATGTATTTATTAGGAATAA
ACAGCATAGAGGTTTAGGAATAAATCAAATATTACTAATAAATACATGAATTGGAAAGAGCAAAAAAATATTGGGGACAGAAATAAAAATGTTTGAAAGC
AAATTCGGTGTTTATTAGGAATAAACAGGACAGAAATATTCCTAATAGAAATATTTCTAATAAATAGGACATAGGCAAATTTTCTATTTACCAAGAACAA
GAATCTGC