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Detailed information on CNT30542072


BLAST search results

BLAST vs Swiss-Prot:
sp|P49168|RR12_PINCO, E-value = 6e-15

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730673Brassica napusCorchorus capsularis14.8326.9687.71179forward
CNT30401817Brassica napusBeta vulgaris4.2320.996.0851forward
CNT30711983Brassica napusGlycine max11.2729.588.24136forward
CNT30235691Brassica napusBrassica oleracea26.685098.76322forward
CNT30556069Brassica napusOryza glaberrima10.4441.5886.51126forward
CNT3060121Brassica napusArabidopsis lyrata69.2685.9294.98836forward
CNT30599240Brassica napusFraxinus excelsior16.2447.2386.22196reverse complement
CNT3018189Brassica napusZea mays11.15087.31134forward
CNT30609565Brassica napusGossypium raimondii16.4923.9588.44199forward
CNT30368658Brassica napusSorghum bicolor10.4421.3284.13126reverse complement
CNT3021978Brassica napusPopulus trichocarpa14.7553.7885.39178reverse complement

Expression of CNT30542072

Sequence

>CNT30542072
GAATAAATCAAACTTTGATGAATAACTAATTCTTTTTTTAGTTTTAGTTATTCTTTTCCCCTTTACTAGTCATTAATAACCAAACGAATTATTCCAATGT
ATAAAAAAAAATTCCAATGGCTTTTGCTACTCTAACCTTCCCCACCACTATTTTTGGCTAGGTATTTTCCTTTGCTTTGAAAGGATAAATTGCCTTGGTA
CTTGATATAAAAAAAATAGAATAACTACAAAAAGTAGTAAATAGAAATGGATAAATAGTGGGTTCCTTCGTTTCTATGGTTACTTCTAAAACGGTGAGGT
CCTCTCTATACACCGGAGCTCCTTCTTTTAATTAATCAATACTATTGGTAACTTGTACAATTCACATTCTTTGGCTCTACCCCATTAATATTCCAGTAAT
AGATCTTTCACAATGAGATCCACTTTATACAGTAACGGTATTTTATTTTAAAATTGATTTGGTCATTTACCCTGTTAGTCCGTTTTTTCTTTCAAGAGTG
GAATCTTTTTAATAAAAAATGGGATTTCCCCCGCTTAATTGATAACCATTTGTTATCATTGGGGGTTTTCTAAAAAATGGAGTTGATTGGATTTGCACCA
ATGTAAACCATAAGTTTCAGACACAATAGAAGATATGAATGATCTATCTTTTTGAAATAATGAATCGAGTTCCTCCATTCTATTTTATTAACAGGTACTG
ATCCTTGATATTTCAAAAAGAATTTCCTTTTTGTGTTTCAGTCTATGATCTAAACGAGTCGCACATACACCCGAGTACATGTTCCTCGTCGCTGAGGGCA
TCCCCGAAGCGCTGGGGATTTTGTGACATTTCGGATTGGCTGTCTTGTATTTCTAATAAGTTGTTTAATGGTTGGCATACGGAATCATATAAATAATGGG
CTGGTTTAGATGGGTTCTAACCGGCTAATTCTGAATTACTTCTCTTCAAGATTCTCTTCAATATAAAAAAAATATATTGAAGAGAATATGAAACTAAACC
TTTAATCTAAAAAGATATAAAATTAGCAGTGGTAGATTTGCATGAAATCGCTCCTATTTTTATTGAACCGCTACAAGATCAACAATGCCATGAGCTTGGG
CTTCTGTTGCTGACATAAAAACATCCCTTTCCATGTCTTCGGATACAACCCATATAGGTTTGCCCGTTCTTTGTACATAAACCCTTGTGATGGTTTCGCG
AAGTTTT