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Detailed information on CNT30235691


BLAST search results

BLAST vs Swiss-Prot:
sp|P49168|RR12_PINCO, E-value = 4e-14

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550041Brassica oleraceaIpomoea triloba27.3313.1485.23176forward
CNT30730673Brassica oleraceaCorchorus capsularis27.826.9686.59179forward
CNT30401817Brassica oleraceaBeta vulgaris12.5833.286.4281forward
CNT30504293Brassica oleraceaNicotiana attenuata20.815.391.04134forward
CNT30711983Brassica oleraceaGlycine max21.1229.585.29136forward
CNT30542072Brassica oleraceaBrassica napus5026.6898.76322forward
CNT30556069Brassica oleraceaOryza glaberrima19.5741.5883.33126forward
CNT3060122Brassica oleraceaArabidopsis lyrata58.2371.794.4375forward
CNT30599240Brassica oleraceaFraxinus excelsior26.8641.6984.39173reverse complement
CNT3018189Brassica oleraceaZea mays20.815084.33134forward
CNT30609565Brassica oleraceaGossypium raimondii30.923.9586.43199forward
CNT3021978Brassica oleraceaPopulus trichocarpa27.6453.7883.15178reverse complement

Expression of CNT30235691

Sequence

>CNT30235691
TTCAATGGTTACTTCTAAAACGGTGAGGTCCTCTCTATACACCGGAGCTCCTTCTTTTAATTAATAAATACTATTGGTAACTTGTACAATTCACATTCTT
TGGCTCTACCCCATTAATATTCCAGTAATAGATCTTTCACAATGAGATCCACTTTATACAGTAACGGTATTTTATTTTAAAATTGATTTGATCATTTACC
CTGTTTGTCCGTGGATAAATTGCCTTGGTACTTGATATAAAAAAAATAGAATAACTACAAAAAGTAGTAAATAGAAATGGATAAATAGTGGGTTCCTTCG
TTTCTATGGTTACTTCTAAAACGTCTATGATCTAAACGAGTCGCACATACACCCGAGTACATGTTCCTCGTCGCTGAGGGCATTCCCGAAGCGCTGGGGA
TTTTGTGAAATTTTGGATTGGATGTCTTGTATTTCTAATAAGTTGTTTAATGGTTGGCATACGGAATCATATAAATAATGGGCTGGTTTAGATGGGTTCT
AACCGGCTAATTCTGAATTACTTCTCTTCAAGATTCTCTTCAATATAAAAAAAATATATTGAAGAGAATATGAAACTAAACCTTTAATCTAAAAAGATAT
AAAATTAGCAGTGGTAGATTTGCATGAAATCGCTCCTATTTTTA