Detailed information on CNT30598709


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513791Fraxinus excelsiorJuglans regia33.592582.7687forward
CNT30698182Fraxinus excelsiorQuercus lobata20.468.4788.6853forward
CNT30618329Fraxinus excelsiorSesamum indicum55.2111.681.12143forward
CNT30503973Fraxinus excelsiorNicotiana attenuata49.8118.8985.27129forward
CNT30635699Fraxinus excelsiorCapsicum annuum55.216.4683.92143forward
CNT3093986Fraxinus excelsiorSolanum tuberosum55.218.2585.31143forward
CNT30509931Fraxinus excelsiorSolanum lycopersicum55.217.4586.71143forward
CNT30570838Fraxinus excelsiorVitis vinifera44.7927.5583.62116forward
CNT30331344Fraxinus excelsiorDioscorea rotundata23.558.9886.8961forward

Expression of CNT30598709

Peptides detected in this lncRNA

>peptide 1 (70 aa)
MADEEDFINNTSKSTTNDRSSPVHPVMGFIEAPVNAPPARMLAPTIKPIASGAIMPTSPFFGSTAVAYTV*

Sequence

>CNT30598709
ATTTAGTACTCTGAACTGGGCAAGGACTCGTGAGAATGGCTGATGAAGAAGACTTCATAAACAATACCAGCAAGTCCACCACCAATGACAGGTCCAGCCC
AGTACACCCAGTGATGGGGTTCATTGAAGCACCAGTAAATGCACCACCCGCCAGAATGTTGGCACCCACAATCAAACCAATTGCAAGTGGTGCAATAATG
CCAACTTCTCCCTTCTTCGGGTCAACAGCGGTGGCGTACACAGTGTAAACCAGGCCGAA