Detailed information on CNT30513791


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30635699Juglans regiaCapsicum annuum38.516.0680.6134forward
CNT3093986Juglans regiaSolanum tuberosum47.999.6480.24167forward
CNT30509931Juglans regiaSolanum lycopersicum47.998.780.84167forward
CNT30598709Juglans regiaFraxinus excelsior2533.5982.7687forward

Expression of CNT30513791

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MKKMSYTIPASPPPTRGPAQYTQWFSQDQLTKGSSIKRTTR*

>peptide 2 (32 aa)
SAVSYCFKLSIACRRQLLVSLVDEKDVVHNSR*

Sequence

>CNT30513791
GATCCGCTGTTTCTTATTGTTTCAAACTTTCAATAGCCTGTCGGAGGCAGCTGCTCGTGAGTTTGGTTGATGAAAAAGATGTCGTACACAATTCCCGCTA
GTCCACCACCGACAAGAGGTCCAGCCCAGTACACCCAGTGGTTCTCCCAGGACCAACTCACCAAGGGAAGCTCCATCAAACGCACCACCCGCTAGAATGT
TAGCACCCAAAATAAATCCGATGGCAATGGGGGCGATAACTCCCAAATTACCCTTCTTTGGATCGAGTGCAGTGGCGTAGACTGTGTAAACTAAACTAAA
AGTCATCACAATCTCGAAGACGAAGGCGTTCCAGACGCTCACTCCTGA