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Detailed information on CNT30635699


BLAST search results

BLAST vs Swiss-Prot:
sp|O64964|TIP11_MAIZE, E-value = 3e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30547910Capsicum annuumIpomoea triloba6.5522.6285.52145forward
CNT30513791Capsicum annuumJuglans regia6.0638.5180.6134forward
CNT30503973Capsicum annuumNicotiana attenuata10.834.9989.12239forward
CNT30708635Capsicum annuumGlycine max5.6922.1484.13126forward
CNT3093986Capsicum annuumSolanum tuberosum25.7132.8389.98569forward
CNT30509931Capsicum annuumSolanum lycopersicum24.928.7189.11551forward
CNT30146734Capsicum annuumMedicago truncatula5.7820.7183.59128forward
CNT30598709Capsicum annuumFraxinus excelsior6.4655.2183.92143forward
CNT30623609Capsicum annuumDaucus carota8.9935.4179.9199forward
CNT30570838Capsicum annuumVitis vinifera6.1932.5480.29137forward
CNT3031788Capsicum annuumTheobroma cacao12.4338.4179.27275forward
CNT30334320Capsicum annuumCynara cardunculus9.6227.6379.34213forward

Expression of CNT30635699

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MNCTSDRSALVKQMTILSLLIKRVQKSKLY*

>peptide 2 (33 aa)
MCEIQEKIKQQEKLLYTALVICSIFVKEVVFEI*

>peptide 3 (32 aa)
LNKNLKDQDIMDAIFLENSKYLIYHQQNGENK*

>peptide 4 (40 aa)
MDNSPSLLFRKVEQIMDVLPRRAAKARYFSLTLLSYSLSV*

>peptide 5 (36 aa)
MQYFWKIQNTLFTTNKMEKINNKSLPNTKVQFNSAH*

>peptide 6 (43 aa)
MCYPTHDNVRCKIGSHEYALNKVTIISLLYIMEGQISPFQTRY*

Sequence

>CNT30635699
CGTTGAATAAAAACTTGAAAGATCAAGACATAATGGATGCAATATTTTTGGAAAATTCAAAATACCTTATTTACCACCAACAAAATGGAGAAAATAAATA
ACAAAAGCCTTCCGAATACAAAAGTACAATTCAACAGTGCCCATTAAACAATAGAGAACACAAACAAGCAAGAAGTTTACAAAAAAAGAGAAAATTAAAC
AACAAGTTGAGATGAAATTTCACATTCTTAAAAATCTCCTCCACTTGGGATTTGCTCATGAGTGTGGCTGATGAAGACGAATTCATAGATAAATCCAGCA
AGCCCACCACCAATAAGTGGTCCAGCTAACCAATGATGGCCCAAATGAAACAGCTGGGTTCATTGATGCTCCAGTAAATGCCCCACCAGCTAGAATGTTG
GCACCAACAATGAAACCAATTGCAATTGGTGCAATTACTCCCAAATCTCCCTTCTTTGGGTCAACTGCAGTTGCATAAACTGTGTAAACAAGACCGAAGG
TCATCACTATCTCGAACACAAGGGCGCTCCATACTGTTACACCTGACACTGCAAATGATCCGGTGCTCTGCGTAGATTTTTAACCATCACAATTGTTAGT
AACACGTAACAATGTATAATTGTATAATTGTTATCACATCTTAAATTATAGTGTATGTATATAAAGCATTTGAAAGAAAAATGTATAATTGGAATATTCG
TTAGATATATGTAGAAGTAAGGACAATGTGCTACCCAACACATGATAATGTTAGGTGCAAAATTGGCTCCCATGAATATGCTTTAAATAAAGTCACCATC
ATATCACTATTGTACATAATGGAAGGACAAATAAGTCCCTTTCAAACTAGATATTAAAAGATTTCCCGCCAATCACTGAGTTCCAAATTTATGCATTGTA
AAATGTGTAAAAACTCTCGATGTCACTATTAATTGCCCTAGATAAACATATTTTAACACCCTAATCAGATATGTGTCACAACTAACAGTGACTAGAACGT
TCCCGAGATAAGACTTTTGGCACCAGCAAAAACTCCAAGATTTATTTTATTTTATCTTATCTTATCTTATTTAAGATACGCTTCATTTTTATAGTAATAA
ATGAATATGACCTTAGAGAATACATTATACTAATTCAATGTAGCTGTGTAGGCGTGATATGTTATAGAAAAGCTCCTAGTACATATCCACACATGTACAC
ACCAAAGTAAATAGATCACACACCTAGTGTACATTTCAGAAATAGTACTAGCTAGTATTGTTTTATAGAACTAAGCAAAATTTCCATGGTTAAAAAATTA
CTATTCCATAAATATAACAATAAATTTATGTGACTATAAATGATTCATCAAAGTTCAAAAAGAAATCTTTGGTTAAAGTAAGATTTTTAACTATAATAAG
AAGCCCTTTTTTTTCTTTTTTGAATAGACATCAAAGGAAAAACGTGACGCACAATTTTTTTTTACTAAGAAAGCATGAATTGCACCTCGGACAGGTCAGC
ATTAGTAAAGCAAATGACTATACTCTCCCTACTGATAAAACGTGTTCAGAAGTCAAAGTTATATTAAATCTCAAGTCCTGTATTTTTTTATACATATTTA
ACAAGCCCTTCAATGCAGTAAAGTTTAGATTGGATAAACTACTGAACTCTCTCTTAAAGAAAGAATATAATAGTAGTATATATTTTAAAGCCTACATCCA
CTCTTGTTCACATGGATAACGACGTTGGGCACCAGTCACCAGCTACATGGACAATTCTCCTTCGCTGCTTTTCAGAAAGGTTGAACAGATAATGGATGTA
CTTCCTAGAAGAGCTGCAAAAGCTCGATATTTCTCTCTCACTCTTCTATCATATTCTTTATCCGTTTAAGATAAGAAAGTAAAACAATAAATTATTTATT
GCATTTCACAATATTATACTGACTATACTATTCCTAGTGACGCTAAACGTGTAAAAAGATCGAAGATAGTTTAATCTCAAGCCTAAAGTGGTTAAAAATT
AAATGCAATAACTGTATAACACAACTAATAAGTGTATGTACAAGTTTTTTTAGTACTAAAACTCTATTATGTGTGAAATTCAGGAAAAGATCAAACAACA
AGAAAAATTACTGTACACAGCTTTAGTAATTTGCTCTATATTTGTAAAAGAGGTTGTATTTGAAATATAACAATCATTTTGCAGAGTTCAAACAATAATA
TACTACAAAATTT