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Detailed information on CNT30586609

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30502432	Musa acuminata	Nicotiana attenuata	21.99	18.23	94.41	161	forward
CNT3047786	Musa acuminata	Prunus dulcis	67.08	89.44	90.43	491	forward
CNT30157743	Musa acuminata	Pistacia vera	35.11	53.88	90.27	257	forward
CNT3098442	Musa acuminata	Solanum tuberosum	22.68	27.04	92.77	166	forward
CNT30655402	Musa acuminata	Rosa chinensis	11.34	24.41	98.8	83	forward
CNT30625292	Musa acuminata	Daucus carota	64.07	65.32	85.5	469	forward
CNT30620564	Musa acuminata	Cajanus cajan	81.15	11.48	84.85	594	forward
CNT30596724	Musa acuminata	Oryza meridionalis	64.89	19.64	91.16	475	forward
CNT3054389	Musa acuminata	Amborella trichopoda	50.14	15.08	89.1	367	forward
CNT3021812	Musa acuminata	Populus trichocarpa	21.58	20.52	92.41	158	forward
CNT30336185	Musa acuminata	Cynara cardunculus	17.9	21.27	90.08	131	forward
CNT30726607	Musa acuminata	Lupinus angustifolius	21.45	13.33	92.36	157	forward

Expression of CNT30586609

Peptides detected in this lncRNA

>peptide 1 (40 aa)
DFXFHNPSSKKEEIRGPYGECGQKSIIESDQNDRIYYLHA*

>peptide 2 (31 aa)
MWSEIHNRVRPKRPNLLSSCISIINYPVEKI*

>peptide 3 (31 aa)
MHKYNKLPSRKDLKIITNPLFLFYYNFLIII*

Sequence

>CNT30586609
GATTTTCTNTTCCATAACCCGAGCTCGAAGAAGGAAGAGATAAGAGGGCCCTATGGAGAATGTGGTCAGAAATCCATAATAGAGTCCGACCAAAACGACC
GAATTTATTATCTTCATGCATAAGTATAATAAATTACCCAGTAGAAAAGATTTAAAAATCATCACAAACCCCCTTTTTCTTTTCTATTACAATTTCTTGA
TTATTATATGATGATTATATGATGATTTCTTAACTTTCCATATATAGAAACGGATAGACTATAAATGACATCTCTTATGTCAATGACACCAAAGGGATAT
TAAATGAATGGAATTGGGATATAGATGGAATATAATGAAATAGAGCCACTTTGAGGTTCCCTATGAAATGAGGCATGGAACGGAGCCACTACGAAGAAGT
TCCGGGAGTTACGAAGGAAGCTTCGCACTCATATTGTTCATGGGTTGAGAACGGGGGTTGAACTCTATGAGGTCGAATCTCCCGTTGTTCCTCAGTAGCT
CAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAATCCTACTTGGGGAGATTTGATTCATTCTTAATTAAAGAATGAAGAATGGAATTA
AAGGGCTCGCTTTGACCGTTAGGAGTAGGTAACCCGTTCGCTGTCTTTGTTTCTATTGCATTCTATCTCATCGTATCACATTCTGTTCTACGATATTTGA
GAATCGCCGTCAATACCTCGGCGTAGATCCGG