Detailed information on CNT30502432


BLAST search results

BLAST vs Swiss-Prot:
sp|P12222|TI214_TOBAC, E-value = 1e-155

BLAST vs NONCODE:
NONCQUT000004, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30195076Nicotiana attenuataPisum sativum23.113.9282.84204forward
CNT30495497Nicotiana attenuataOlea europaea24.1298.6192.96213forward
CNT3090855Nicotiana attenuataSolanum tuberosum88.5670.9698.85782forward
CNT30586609Nicotiana attenuataMusa acuminata18.2321.9994.41161forward
CNT30625292Nicotiana attenuataDaucus carota49.0460.3195.61433forward
CNT30620564Nicotiana attenuataCajanus cajan65.1211.1184.7575forward
CNT3054389Nicotiana attenuataAmborella trichopoda46.3216.895.11409forward
CNT30726607Nicotiana attenuataLupinus angustifolius39.7529.891.17351forward

Expression of CNT30502432

Peptides detected in this lncRNA

>peptide 1 (36 aa)
IFFSGSLLFLFSPLHFGSSFYFYISFFLTFHPFFCF*

>peptide 2 (32 aa)
MNIMSCPVIKPVVADTFFSVPSSITRARRRKR*

>peptide 3 (54 aa)
GSSSVDPSCSCLVPFISEALSISTSLSSSLSTLSSVFEASFSFLVRMGEGILPK*

Sequence

>CNT30502432
GGATCTTCTTCAGTGGATCCCTCTTGTTCCTGTTTAGTCCCCTTCATTTCGGAAGCTCTTTCTATTTCTACATCTCTTTCTTCCTCACTTTCCACCCTTT
CTTCTGTTTTTGAGGCTTCTTTCAGTTTCTTAGTAAGAATGGGTGAGGGTATTCTGCCTAAATAGTAGACACAGGTAATAAATAAGAGAATACTAAAGAT
CCGAGCCATAGAATTTCTCAATTCTAACACAAGGTACTTATTAGATCGAATGTACTTCTTAGATCTAATAGAATGATTTTGCCGTATCCAGACTAATACC
AATCCAAGCCATTTCATGAATAAAATGTGACCAATTAACCAACCAACAAAACCACTTGTTACAAATAAGATCTTGCTGTTGCATCGAAAGAGATAAATGT
TGACTAATCTGGCTAACATTGAACTTGGTAAAAAGAAATGGTTGAATAATTTAAAAATTAGATTATTCAGGAATACACATTGAATGCTGAGATTACGCAT
TGAATTTCTGGTAGTAGATCCATAATCAAAAAAGTGTTTGTGATTGTTCCAGAAGAAATGAAACAAAAGATATGGTAGAGCTAGGACAGTTATTGTATGA
GGTCTACCCAATGCTAGATGCAGAGGCGCATAATAGATCGATATGAACATCATGAGCTGTCCCGTAATAAAACCAGTTGTTGCTGATACCTTCTTCTCGG
TTCCTTCTTCCATAACCAGAGCTCGGAGAAGGAAGAGATAAGAGGGCCCTATGGAGAATGTGGTCAGAAATCCATAATAGAGTCCGACCACAACGACCGA
ATTGATTATCTTCATGCATAAGGATACTAGATTACCTAGTAGAAAAGATTGAAAAATCATCACAAACCTCCCTTATTTCTTTT