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Detailed information on CNT3098442


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3047786Solanum tuberosumPrunus dulcis27.230.4288.62167forward
CNT30586609Solanum tuberosumMusa acuminata27.0422.6892.77166forward

Expression of CNT3098442

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MERENGGSRVPATPESSKHKLKQIMTKED*

>peptide 2 (60 aa)
MSLKKQAHSHSRNQRKAFCPVMKFEVSGLLSLLLQLAVSVNLVSGLLFYSICLLDWLLCQ*

>peptide 3 (53 aa)
MRKATTCLSSNGEGKWWKQGTSYSRKQQTQAQTDYDKGGLKVISLQFTSAFLD*

Sequence

>CNT3098442
CATCAAAGTTCAGTTCTTCTCTTCAGCATTCTCCATGTGAATTAAGTTCATTGAACAAGGTATAAGTTACCCAAGAAAGTAGGAGTAGTGAGAGAGGTTT
ATTGGTTTTGATGAGAAAGGCAACAACTTGTTTGAGCTCGAATGGAGAGGGAAAATGGTGGAAGCAGGGTACCAGCTACTCCAGAAAGCAGCAAACACAA
GCTCAAACAGATTATGACAAAGGAGGATTGAAAGTGATTTCACTACAGTTTACTAGCGCATTCCTAGACTAAGACTATGTCATTGAAGAAGCAAGCTCAC
TCTCATTCCAGGAATCAGAGGAAGGCATTTTGTCCGGTAATGAAGTTCGAAGTTTCCGGCTTGCTTTCTCTCCTCTTGCAGTTGGCAGTCTCAGTCAACC
TTGTTTCGGGCCTTCTCTTCTACTCTATCTGCTTATTGGATTGGTTGTTATGTCAATGACACCAAAGGGATATTAAATGAATGGAATTGGGATATGGATG
GAATATAATGAAATAGAGCCACTTTGAGGTTTCCTCTGGAATGAGGCATGCATGGAAGGGAGCCACTACGAAGAAGTTCCGAGAGTTACGAAGGAAGCTT
CGAGCTCATATTGG