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Detailed information on CNT30336185


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30586609Cynara cardunculusMusa acuminata21.2717.990.08131forward
CNT3054389Cynara cardunculusAmborella trichopoda24.686.2486.84152forward

Expression of CNT30336185

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MHGHDKSDLDQKEVDDLMMIGEPVTEATVIAISGLLYDDFETFHIYKRDRI*

Sequence

>CNT30336185
TTTTTAATATGCAATATGCACCCAAAAAGCATGCCATACATGTTGCATATGTGAACTTTTTCTTTAAATAGTTTTTATTGCTAAAATCAAGTAGCACAAC
CCAAATCTTCATGGTTTGGTTTGGGACTGAACCGCCTTTCAAGTTTTGGATGAAAGGATTGTGGAAGGTGATTGATGCACGGACATGACAAATCTGATCT
AGATCAGAAAGAAGTTGATGACCTGATGATGATAGGGGAACCGGTAACTGAAGCCACGGTTATTGCAATTTCTGGATTATTATATGATGATTTTGAAACT
TTCCATATTTACAAAAGAGATAGAATATAAATGACATATGTTATGTCAATGACACCAAAAGGATATTAAATGAATGGAATTGAGATATGGATGGAATATA
ATGAAATAGGGGGTTTGAGTTCAAAGTCTTAATATTGTATTGTTAAATTTGTTGGTTTTCAGCTTAAAATTTGTTTTTATACATCTCGTTCGATCATCAA
ATGTTAGACATCTCTAACAATTTCTGTATTTTAGATATTTTAACATCAATTATATTATTAAAAAAAATTATATTTTACCATATATGATAATTTTATGTTC
TTTTTTCTTACAAAAT