Detailed information on CNT30625292


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0G9Q4|TI214_DAUCA, E-value = 1e-73

BLAST vs NONCODE:
NONSLYT001779, E-value = 2e-173

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30195076Daucus carotaPisum sativum29.2514.3280.95210forward
CNT30502432Daucus carotaNicotiana attenuata60.3149.0495.61433forward
CNT3047786Daucus carotaPrunus dulcis22.0128.7891.77158forward
CNT3090855Daucus carotaSolanum tuberosum46.6630.495.22335forward
CNT30586609Daucus carotaMusa acuminata65.3264.0785.5469forward
CNT30620564Daucus carotaCajanus cajan55.157.6587.12396forward
CNT3054389Daucus carotaAmborella trichopoda89.1426.2988.59640forward
CNT3021812Daucus carotaPopulus trichocarpa22.4220.9198.14161forward
CNT30726607Daucus carotaLupinus angustifolius50.1430.5687.78360forward

Expression of CNT30625292

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MHKDTRLPSRKDFKIITNLPFSFLLQFLDYYMMIFELSIHRKEI*

Sequence

>CNT30625292
ATGAGATTATTCAGGAATACGCATTGAATGCTGAGATTACGCATTGAATTTCTGGTAGTAGATCCATAATCAAAAAAGTTTTTGTGATTTTTCCAGAAGA
AATGAAACAAAAGATACGGTAGAGCTAGTACAGTTATTGTATGAGGTCTACCCAATGCTAGATGCAGAGGCGCATAATAGATCGATATGAACATCATGAG
CTGTCCCGTAATAAAACCTGTTGTTGCTGATACCTTCTTCTCGGTTCCTTCTTCTCCTTCTTCCATAACCTGAGCTCGGAGAAGGAAGAGATAAGAGGGC
CCTATGGAGAATGTGGTCAGAAATCCATAATAGAGTCCGACCACAACGACCGAATTGATTATCTTCATGCATAAGGATACTAGATTACCTAGTAGAAAAG
ATTTCAAAATCATCACAAACCTCCCTTTTTCTTTTCTATTGCAATTTCTGGATTATTATATGATGATTTTTGAACTTTCCATACATAGAAAAGAAATCTA
AAGAGATAGACTAGAAACGACATCTGTTATGTCAATGACACCAAAGGGATATTAAATGACAAAGGGATATTAAATGAATGGAATTGGGATATGGATGGAA
TATAATGAAATAGAGCCACTTTGTGGTTCCCTATGAAATCAGGCATGGAAGGGGGCCACTACGAAGAAGTTCCGGGAGTTACGAAAGAAGCTTCGAGCTC
ATATTGGTCATGGGTTGA