Detailed information on CNT30157743


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30195089Pistacia veraPisum sativum23.276.3989.19111forward
CNT3047786Pistacia veraPrunus dulcis57.8650.2791.67276forward
CNT30586609Pistacia veraMusa acuminata53.8835.1190.27257forward
CNT30607450Pistacia veraGossypium raimondii59.7519.287.37285reverse complement
CNT30655402Pistacia veraRosa chinensis16.5623.2497.4779forward
CNT30718598Pistacia veraMalus domestica golden54.93101.1688.17262reverse complement
CNT30622828Pistacia veraDaucus carota35.4318.6788.76169forward
CNT30620564Pistacia veraCajanus cajan94.138.6883.52449forward
CNT30596724Pistacia veraOryza meridionalis45.078.8986.98215forward

Expression of CNT30157743

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MQSSILSRGHNYREQTFNDEECIFAMLLILNLLFCPSLAK

Sequence

>CNT30157743
GATAGAATCTCCCGATGTTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTTGAATCCTACTTGGGGAGATTTGATTCA
TTCCGAATTAAGATTTCAAAATGTCAGAATGAAAGGGTTCGCTTTGATCGTTAAAAGTAGGTAACCCGTTCCTTGTATCTTTGTTTCTATTGCATTCTAC
CTCATCATATCACATTCTGTTCTACGATATTTGAGAATCACCGTCAATACCTCGGTGTAGGTCAGGGATAATCCTTTGTTCCATAGTCCTGAGGCTATTT
ATAATTAGCCAATTAAGAATTCTTAGATGTACTAGTACTAGCAAGTGCATCAAAGATGCAGTCATCAATTCTCTCGAGAGGCCACAATTACCGCGAGCAA
ACATTTAATGATGAGGAATGCATTTTTGCTATGCTACTAATACTTAATCTGCTATTCTGCCCAAGCCTGGCCAAGGA