Detailed information on CNT30655402


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30274936Rosa chinensisChenopodium quinoa21.763.4298.6574forward
CNT30195089Rosa chinensisPisum sativum24.714.8395.2484forward
CNT3047786Rosa chinensisPrunus dulcis24.1214.9498.7882forward
CNT30157743Rosa chinensisPistacia vera23.2416.5697.4779forward
CNT30636182Rosa chinensisCapsicum annuum17.0622.1496.5558forward
CNT30586609Rosa chinensisMusa acuminata24.4111.3498.883forward
CNT3016170Rosa chinensisZea mays31.4711.7596.26107reverse complement
CNT30620564Rosa chinensisCajanus cajan24.711.6298.8184forward

Expression of CNT30655402

Peptides detected in this lncRNA

>peptide 1 (43 aa)
PLGRVSLLSELAGRGDRLINMNLESGWLTAAPLSWRLSGRGLS*

Sequence

>CNT30655402
GCCCCTCGGTAGAGTGAGTCTACTTAGCGAACTGGCAGGACGCGGAGATCGATTGATCAATATGAATCTCGAGAGTGGATGGTTGACCGCCGCCCCCTTG
TCCTGGAGGCTCTCCGGCCGGGGGCTATCGTAACCTTTTCTCCGTGACGAACCCATTTTATTTTTCGGGTGGAACGAGAGTCGGCTTCCTTAAATCCGTT
GTTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCAAATCCTACTTGGGGAGATTTTCTAGTTATCGCTTTTATGACC
TAGCGACCCTCCTTAGTTTCTAAACTCGCGGAATCGCGGG