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Detailed information on CNT30585367


BLAST search results

BLAST vs Swiss-Prot:
sp|P25776|ORYA_ORYSJ, E-value = 3e-45

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676299Echinochloa crusgalliSetaria viridis65.7635.692.27194forward
CNT30563550Echinochloa crusgalliActinidia chinensis25.087.8985.1474forward
CNT30462305Echinochloa crusgalliSaccharum spontaneum76.6155.1288.5226forward
CNT3017206Echinochloa crusgalliZea mays74.2474.7492.24219forward
CNT3067329Echinochloa crusgalliLeersia perrieri51.5359.8484.21152forward
CNT30344730Echinochloa crusgalliEragrostis tef95.932490.81283forward
CNT30370041Echinochloa crusgalliOryza glumipatula90.5125.8786.52267forward
CNT3033044Echinochloa crusgalliTheobroma cacao30.1711.7183.1589forward
CNT30319475Echinochloa crusgalliAsparagus officinalis202.389.8359forward
CNT3099546Echinochloa crusgalliOryza rufipogon26.447.5787.1878forward
CNT30575980Echinochloa crusgalliOryza barthii65.7694.1787.63194forward
CNT30603971Echinochloa crusgalliOryza punctata74.9214.186.43221forward

Expression of CNT30585367

Peptides detected in this lncRNA

>peptide 1 (96 aa)
YHETGVVVVADGRRRDGGRRRRPWVRRVRALLQRVRRLDGDATLAAGRLDIALHPDVAGLTPAAAPRVLHDPVVLAVLCAVADGCDTVVQSCSTGSG

Sequence

>CNT30585367
TTTACCATGAGACAGGAGTAGTAGTTGTCGCAGACGGTCGGCGGCGGGACGGGGGACGGCGGCGTCGGCCCTGGGTTCGGCGGGTTCGCGCCCTTCTTCA
GAGGGTACGACGGCTCGACGGCGATGCCACACTTGCCGCTGGACGCCTTGACATTGCGCTCCATCCGGATGTAGCCGGACTCACCCCAGCTGCCGCCCCA
CGAGTTCTTCACGATCCAGTAGTCCTTGCCGTTCTCTGTGCCGTAGCCGACGGCTGTGACACCGTGGTCCAGAGCTGTTCCACAGGCTCCGGTGA