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Detailed information on CNT3093143


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FNB0|CHLH_ARATH, E-value = 7e-62

BLAST vs NONCODE:
NONSTUT001752, E-value = 4e-159

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3020132Solanum tuberosumCitrullus lanatus19.9220.0884.35147forward
CNT30524804Solanum tuberosumPhaseolus vulgaris25.3424.4483.96187forward
CNT3084609Solanum tuberosumVigna radiata27.9119.6884.47206forward
CNT30119800Solanum tuberosumCitrus clementina23.9826.1883.62177forward

Expression of CNT3093143

Peptides detected in this lncRNA

>peptide 1 (39 aa)
NTNKYISVLFSIYQEVLSIRVQITRCFPPVLFKSSGIGG*

>peptide 2 (77 aa)
MNYFFNQFSRSLRQPLNVVPVFLEIFEHRVEQLVEPPELGATPKCCSTILLLSGRPKAMSSQASTSDQKNQQKISSS*

Sequence

>CNT3093143
TGAACACCAATAAATACATTTCCGTACTGTTTTCCATATACCAAGAGGTTCTCTCCATCAGAGTTCAGATTACCAGGTGCTTTCCCCCAGTTCTCTTCAA
GAGCAGTGGCATAGGGGGTTAGCTTCTGGTATTCTCGGACGTTCATCTTGTAAGCTACGTTAAGATTTGGACTGCTGAACTGAGCTTCTTTGTCATGAAT
TACTTCTTCAATCAGTTCAGCAGAAGTCTCAGGCAGCCCCTCAACGTTGTACCCGTCTTTCTTGAGATCTTTGAGCACAGAGTAGAGCAACTTGTAGAGC
CACCTGAATTGGGTGCAACCCCAAAGTGCTGTTCAACCATTCTTCTGTTGTCTGGAAGACCAAAGGCAATGTCCTCACAAGCTTCAACATCTGATCAGAA
AAACCAGCAGAAGATTTCTTCTTCTTGAAAAGCTGAAAAAATGGACTTTTTGATTGCCCCAACTGAGACATACTAAAAGATCCCAACTTGTTCAGCCTCA
TCACTTCAGGCATTGATGGAAACACAAGAACAGCATTAAGCCTATCCCTTTCTTTCTCCACTGCAGACTTAACCTTTAAAGCCAATTCTTCCACAAAAAT
CAATGACCCAATAAATATATTTGCATCCTCAAGATCTTTACAGAAAGTTTTATAAGCATTTTCATCTCTAAGCTCCTCAACCAAATACCCCACAACCTCA
AAAGAAGCAAACTCACCATTCTTGTTCAGTGTCTGAAC