Detailed information on CNT30312316


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523577Camelina sativaSetaria italica79.6848.1482.89298forward
CNT30377120Camelina sativaArabidopsis thaliana104.8161.8388.01392forward
CNT30379142Camelina sativaManihot esculenta98.9339.6179.73370forward
CNT30403407Camelina sativaBeta vulgaris89.5782.9280.3335forward
CNT30591858Camelina sativaMusa acuminata62.345.9681.12233forward
CNT30442780Camelina sativaAegilops tauschii39.0418.4182.88146forward
CNT30263845Camelina sativaBrassica rapa91.719887.46343forward
CNT30355218Camelina sativaLactuca sativa39.321.6585.03147forward
CNT30150023Camelina sativaBrachypodium distachyon60.730.2781.5227forward
CNT30497803Camelina sativaDigitaria exilis61.531.9983.04230forward

Expression of CNT30312316

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MLDCSLETLDCSLETWGCSSERWENRKDL*

>peptide 2 (47 aa)
MLDCNLVKLGCSQEKWGCMQVKSGYKQVMLGCKQAKSGCSLVMLGCS*

Sequence

>CNT30312316
CTTGGAGATGTAGGACTGTAGGGACTAGATGGTGATAGTCTTGCATTGCTAGGAGAGTAAGCAAGAGATGGGCTATATTTAGCAGACTGAGGGTTGTAGC
TTGGAGACGTAGGACCATAGCTTGGTGATGTTGGACTGTAACTTGGTGAAGTTGGGCTGTAGCCAGGAGAAGTGGGGCTGTATGCAGGTGAAGTCGGGCT
ATAAGCAGGTGATGTTGGGCTGTAAGCAGGCGAAGTCGGGCTGTAGCTTGGTGATGTTGGGCTGTAGCTAGGAGATGTTGGACTGTAGCTTGGAGACGTT
GGACTGTAGCTTGGAGACGTGGGGCTGTAGCTCGGAGAGGTGGGAGAATAGGAAGGACTTGTAGGAGAATAAGC